Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LIN7CQ9NUP9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIN7CQ9NUP9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LIN7CQ9NUP9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIN7CQ9NUP9 U85056.1-201ENST00000616429 682 ntBASIC19.28■□□□□ 0.68
LIN7CQ9NUP9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIN7CQ9NUP9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LIN7CQ9NUP9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIN7CQ9NUP9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.28■□□□□ 0.68
LIN7CQ9NUP9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LIN7CQ9NUP9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.27■□□□□ 0.68
LIN7CQ9NUP9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.27■□□□□ 0.68
LIN7CQ9NUP9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.27■□□□□ 0.68
LIN7CQ9NUP9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LIN7CQ9NUP9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LIN7CQ9NUP9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LIN7CQ9NUP9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIN7CQ9NUP9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIN7CQ9NUP9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIN7CQ9NUP9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIN7CQ9NUP9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIN7CQ9NUP9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LIN7CQ9NUP9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIN7CQ9NUP9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LIN7CQ9NUP9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.26■□□□□ 0.67
LIN7CQ9NUP9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIN7CQ9NUP9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LIN7CQ9NUP9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIN7CQ9NUP9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIN7CQ9NUP9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIN7CQ9NUP9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LIN7CQ9NUP9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIN7CQ9NUP9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
LIN7CQ9NUP9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.25■□□□□ 0.67
LIN7CQ9NUP9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIN7CQ9NUP9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LIN7CQ9NUP9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LIN7CQ9NUP9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIN7CQ9NUP9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIN7CQ9NUP9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIN7CQ9NUP9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIN7CQ9NUP9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LIN7CQ9NUP9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIN7CQ9NUP9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LIN7CQ9NUP9 AL592293.1-201ENST00000502889 1188 ntBASIC19.24■□□□□ 0.67
LIN7CQ9NUP9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIN7CQ9NUP9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIN7CQ9NUP9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIN7CQ9NUP9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LIN7CQ9NUP9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LIN7CQ9NUP9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LIN7CQ9NUP9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.23■□□□□ 0.67
LIN7CQ9NUP9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.23■□□□□ 0.67
LIN7CQ9NUP9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LIN7CQ9NUP9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.23■□□□□ 0.67
LIN7CQ9NUP9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.23■□□□□ 0.67
LIN7CQ9NUP9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LIN7CQ9NUP9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LIN7CQ9NUP9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LIN7CQ9NUP9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LIN7CQ9NUP9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIN7CQ9NUP9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIN7CQ9NUP9 AC012676.1-201ENST00000574705 1949 ntBASIC19.22■□□□□ 0.67
LIN7CQ9NUP9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LIN7CQ9NUP9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIN7CQ9NUP9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.22■□□□□ 0.67
LIN7CQ9NUP9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIN7CQ9NUP9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIN7CQ9NUP9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIN7CQ9NUP9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIN7CQ9NUP9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.21■□□□□ 0.67
LIN7CQ9NUP9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LIN7CQ9NUP9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LIN7CQ9NUP9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
LIN7CQ9NUP9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LIN7CQ9NUP9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.21■□□□□ 0.67
LIN7CQ9NUP9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LIN7CQ9NUP9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.21■□□□□ 0.67
LIN7CQ9NUP9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN7CQ9NUP9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN7CQ9NUP9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.2■□□□□ 0.66
LIN7CQ9NUP9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LIN7CQ9NUP9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
LIN7CQ9NUP9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN7CQ9NUP9 KRT18P60-201ENST00000312876 1297 ntBASIC19.2■□□□□ 0.66
LIN7CQ9NUP9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.2■□□□□ 0.66
LIN7CQ9NUP9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN7CQ9NUP9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LIN7CQ9NUP9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN7CQ9NUP9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN7CQ9NUP9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN7CQ9NUP9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN7CQ9NUP9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms