Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KLHL1Q9NR64 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.8■■□□□ 1.08
KLHL1Q9NR64 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.8■■□□□ 1.08
KLHL1Q9NR64 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
KLHL1Q9NR64 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KLHL1Q9NR64 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
KLHL1Q9NR64 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
KLHL1Q9NR64 KRT18P24-201ENST00000344739 1156 ntBASIC21.79■■□□□ 1.08
KLHL1Q9NR64 BX664725.1-201ENST00000438252 379 ntBASIC21.79■■□□□ 1.08
KLHL1Q9NR64 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.79■■□□□ 1.08
KLHL1Q9NR64 KRT125P-201ENST00000546827 989 ntBASIC21.79■■□□□ 1.08
KLHL1Q9NR64 Z92544.1-202ENST00000571933 1220 ntBASIC21.79■■□□□ 1.08
KLHL1Q9NR64 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.79■■□□□ 1.08
KLHL1Q9NR64 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KLHL1Q9NR64 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KLHL1Q9NR64 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.79■■□□□ 1.08
KLHL1Q9NR64 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KLHL1Q9NR64 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.79■■□□□ 1.08
KLHL1Q9NR64 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KLHL1Q9NR64 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KLHL1Q9NR64 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.78■■□□□ 1.08
KLHL1Q9NR64 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
KLHL1Q9NR64 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KLHL1Q9NR64 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KLHL1Q9NR64 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
KLHL1Q9NR64 AL356441.2-201ENST00000443009 864 ntBASIC21.78■■□□□ 1.08
KLHL1Q9NR64 AC120024.1-201ENST00000562672 995 ntBASIC21.78■■□□□ 1.08
KLHL1Q9NR64 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KLHL1Q9NR64 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
KLHL1Q9NR64 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KLHL1Q9NR64 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KLHL1Q9NR64 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.77■■□□□ 1.08
KLHL1Q9NR64 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
KLHL1Q9NR64 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KLHL1Q9NR64 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
KLHL1Q9NR64 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.75■■□□□ 1.07
KLHL1Q9NR64 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KLHL1Q9NR64 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KLHL1Q9NR64 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
KLHL1Q9NR64 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KLHL1Q9NR64 AL592295.1-201ENST00000400984 884 ntBASIC21.75■■□□□ 1.07
KLHL1Q9NR64 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.75■■□□□ 1.07
KLHL1Q9NR64 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
KLHL1Q9NR64 AC093323.1-202ENST00000635031 2045 ntBASIC21.74■■□□□ 1.07
KLHL1Q9NR64 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KLHL1Q9NR64 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KLHL1Q9NR64 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KLHL1Q9NR64 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
KLHL1Q9NR64 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.74■■□□□ 1.07
KLHL1Q9NR64 MIR4787-201ENST00000607364 84 ntBASIC21.74■■□□□ 1.07
KLHL1Q9NR64 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
KLHL1Q9NR64 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
KLHL1Q9NR64 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KLHL1Q9NR64 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KLHL1Q9NR64 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KLHL1Q9NR64 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.73■■□□□ 1.07
KLHL1Q9NR64 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
KLHL1Q9NR64 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KLHL1Q9NR64 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.73■■□□□ 1.07
KLHL1Q9NR64 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
KLHL1Q9NR64 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
KLHL1Q9NR64 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
KLHL1Q9NR64 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.72■■□□□ 1.07
KLHL1Q9NR64 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KLHL1Q9NR64 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KLHL1Q9NR64 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
KLHL1Q9NR64 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KLHL1Q9NR64 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.72■■□□□ 1.07
KLHL1Q9NR64 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KLHL1Q9NR64 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.72■■□□□ 1.07
KLHL1Q9NR64 AC096887.2-201ENST00000623443 1957 ntBASIC21.72■■□□□ 1.07
KLHL1Q9NR64 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
KLHL1Q9NR64 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KLHL1Q9NR64 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.71■■□□□ 1.07
KLHL1Q9NR64 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.71■■□□□ 1.07
KLHL1Q9NR64 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.71■■□□□ 1.07
KLHL1Q9NR64 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KLHL1Q9NR64 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
KLHL1Q9NR64 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
KLHL1Q9NR64 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KLHL1Q9NR64 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KLHL1Q9NR64 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.7■■□□□ 1.06
KLHL1Q9NR64 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
KLHL1Q9NR64 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.69■■□□□ 1.06
KLHL1Q9NR64 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KLHL1Q9NR64 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KLHL1Q9NR64 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.69■■□□□ 1.06
KLHL1Q9NR64 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
KLHL1Q9NR64 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KLHL1Q9NR64 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KLHL1Q9NR64 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.69■■□□□ 1.06
KLHL1Q9NR64 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
KLHL1Q9NR64 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.68■■□□□ 1.06
KLHL1Q9NR64 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KLHL1Q9NR64 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.68■■□□□ 1.06
KLHL1Q9NR64 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KLHL1Q9NR64 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.68■■□□□ 1.06
KLHL1Q9NR64 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.68■■□□□ 1.06
KLHL1Q9NR64 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KLHL1Q9NR64 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms