Protein–RNA interactions for Protein: Q9NPI1

BRD7, Bromodomain-containing protein 7, humanhuman

Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD7Q9NPI1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD7Q9NPI1 AC007029.1-201ENST00000604183 313 ntBASIC20.73■□□□□ 0.91
BRD7Q9NPI1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
BRD7Q9NPI1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.73■□□□□ 0.91
BRD7Q9NPI1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD7Q9NPI1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRD7Q9NPI1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRD7Q9NPI1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRD7Q9NPI1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRD7Q9NPI1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRD7Q9NPI1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
BRD7Q9NPI1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD7Q9NPI1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.71■□□□□ 0.91
BRD7Q9NPI1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD7Q9NPI1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD7Q9NPI1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BRD7Q9NPI1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
BRD7Q9NPI1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD7Q9NPI1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRD7Q9NPI1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD7Q9NPI1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.7■□□□□ 0.9
BRD7Q9NPI1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD7Q9NPI1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD7Q9NPI1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRD7Q9NPI1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRD7Q9NPI1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD7Q9NPI1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD7Q9NPI1 LINC00543-201ENST00000567234 1845 ntBASIC20.7■□□□□ 0.9
BRD7Q9NPI1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.7■□□□□ 0.9
BRD7Q9NPI1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
BRD7Q9NPI1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.7■□□□□ 0.9
BRD7Q9NPI1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
BRD7Q9NPI1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.7■□□□□ 0.9
BRD7Q9NPI1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD7Q9NPI1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD7Q9NPI1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.69■□□□□ 0.9
BRD7Q9NPI1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRD7Q9NPI1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRD7Q9NPI1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRD7Q9NPI1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRD7Q9NPI1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
BRD7Q9NPI1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD7Q9NPI1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BRD7Q9NPI1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
BRD7Q9NPI1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD7Q9NPI1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.68■□□□□ 0.9
BRD7Q9NPI1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.68■□□□□ 0.9
BRD7Q9NPI1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.68■□□□□ 0.9
BRD7Q9NPI1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
BRD7Q9NPI1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD7Q9NPI1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.68■□□□□ 0.9
BRD7Q9NPI1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.68■□□□□ 0.9
BRD7Q9NPI1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD7Q9NPI1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD7Q9NPI1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.67■□□□□ 0.9
BRD7Q9NPI1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.67■□□□□ 0.9
BRD7Q9NPI1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD7Q9NPI1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
BRD7Q9NPI1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
BRD7Q9NPI1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
BRD7Q9NPI1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD7Q9NPI1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
BRD7Q9NPI1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD7Q9NPI1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.67■□□□□ 0.9
BRD7Q9NPI1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD7Q9NPI1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.67■□□□□ 0.9
BRD7Q9NPI1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD7Q9NPI1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD7Q9NPI1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRD7Q9NPI1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BRD7Q9NPI1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRD7Q9NPI1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BRD7Q9NPI1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRD7Q9NPI1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.66■□□□□ 0.9
BRD7Q9NPI1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRD7Q9NPI1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BRD7Q9NPI1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BRD7Q9NPI1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BRD7Q9NPI1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRD7Q9NPI1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BRD7Q9NPI1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRD7Q9NPI1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
BRD7Q9NPI1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRD7Q9NPI1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRD7Q9NPI1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BRD7Q9NPI1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
BRD7Q9NPI1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BRD7Q9NPI1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.64■□□□□ 0.89
BRD7Q9NPI1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BRD7Q9NPI1 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.64■□□□□ 0.89
BRD7Q9NPI1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
BRD7Q9NPI1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRD7Q9NPI1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRD7Q9NPI1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRD7Q9NPI1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRD7Q9NPI1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.63■□□□□ 0.89
BRD7Q9NPI1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD7Q9NPI1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRD7Q9NPI1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
BRD7Q9NPI1 AC026202.3-201ENST00000600805 1127 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms