Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
NEUROD4Q9HD90 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEUROD4Q9HD90 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NEUROD4Q9HD90 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NEUROD4Q9HD90 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.97■■□□□ 1.11
NEUROD4Q9HD90 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEUROD4Q9HD90 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEUROD4Q9HD90 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
NEUROD4Q9HD90 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEUROD4Q9HD90 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NEUROD4Q9HD90 DUX4L9-201ENST00000449051 1259 ntBASIC21.96■■□□□ 1.11
NEUROD4Q9HD90 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.96■■□□□ 1.11
NEUROD4Q9HD90 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
NEUROD4Q9HD90 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NEUROD4Q9HD90 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
NEUROD4Q9HD90 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
NEUROD4Q9HD90 HLA-L-211ENST00000482052 1765 ntBASIC21.95■■□□□ 1.1
NEUROD4Q9HD90 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NEUROD4Q9HD90 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.95■■□□□ 1.1
NEUROD4Q9HD90 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEUROD4Q9HD90 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
NEUROD4Q9HD90 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEUROD4Q9HD90 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEUROD4Q9HD90 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.95■■□□□ 1.1
NEUROD4Q9HD90 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NEUROD4Q9HD90 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
NEUROD4Q9HD90 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEUROD4Q9HD90 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEUROD4Q9HD90 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEUROD4Q9HD90 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
NEUROD4Q9HD90 AL033527.3-201ENST00000566366 1196 ntBASIC21.94■■□□□ 1.1
NEUROD4Q9HD90 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEUROD4Q9HD90 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.94■■□□□ 1.1
NEUROD4Q9HD90 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEUROD4Q9HD90 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NEUROD4Q9HD90 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEUROD4Q9HD90 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NEUROD4Q9HD90 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
NEUROD4Q9HD90 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEUROD4Q9HD90 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NEUROD4Q9HD90 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.93■■□□□ 1.1
NEUROD4Q9HD90 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEUROD4Q9HD90 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEUROD4Q9HD90 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NEUROD4Q9HD90 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
NEUROD4Q9HD90 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
NEUROD4Q9HD90 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.92■■□□□ 1.1
NEUROD4Q9HD90 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
NEUROD4Q9HD90 U85056.1-201ENST00000616429 682 ntBASIC21.92■■□□□ 1.1
NEUROD4Q9HD90 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
NEUROD4Q9HD90 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
NEUROD4Q9HD90 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
NEUROD4Q9HD90 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NEUROD4Q9HD90 AL592295.1-201ENST00000400984 884 ntBASIC21.91■■□□□ 1.1
NEUROD4Q9HD90 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
NEUROD4Q9HD90 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NEUROD4Q9HD90 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NEUROD4Q9HD90 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.91■■□□□ 1.1
NEUROD4Q9HD90 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.9■■□□□ 1.1
NEUROD4Q9HD90 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEUROD4Q9HD90 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEUROD4Q9HD90 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NEUROD4Q9HD90 AC129492.7-201ENST00000622992 756 ntBASIC21.9■■□□□ 1.1
NEUROD4Q9HD90 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NEUROD4Q9HD90 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NEUROD4Q9HD90 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.89■■□□□ 1.1
NEUROD4Q9HD90 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
NEUROD4Q9HD90 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.89■■□□□ 1.09
NEUROD4Q9HD90 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NEUROD4Q9HD90 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NEUROD4Q9HD90 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NEUROD4Q9HD90 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NEUROD4Q9HD90 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NEUROD4Q9HD90 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NEUROD4Q9HD90 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.88■■□□□ 1.09
NEUROD4Q9HD90 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NEUROD4Q9HD90 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.88■■□□□ 1.09
NEUROD4Q9HD90 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NEUROD4Q9HD90 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NEUROD4Q9HD90 AC090877.2-201ENST00000558441 1738 ntBASIC21.87■■□□□ 1.09
NEUROD4Q9HD90 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NEUROD4Q9HD90 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.87■■□□□ 1.09
NEUROD4Q9HD90 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NEUROD4Q9HD90 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NEUROD4Q9HD90 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
NEUROD4Q9HD90 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
NEUROD4Q9HD90 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NEUROD4Q9HD90 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
NEUROD4Q9HD90 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.86■■□□□ 1.09
NEUROD4Q9HD90 AC004812.2-201ENST00000611079 2094 ntBASIC21.86■■□□□ 1.09
NEUROD4Q9HD90 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.86■■□□□ 1.09
NEUROD4Q9HD90 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
NEUROD4Q9HD90 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NEUROD4Q9HD90 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NEUROD4Q9HD90 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
NEUROD4Q9HD90 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
NEUROD4Q9HD90 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NEUROD4Q9HD90 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NEUROD4Q9HD90 KRT18P60-201ENST00000312876 1297 ntBASIC21.85■■□□□ 1.09
NEUROD4Q9HD90 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms