Protein–RNA interactions for Protein: Q9HCN8

SDF2L1, Stromal cell-derived factor 2-like protein 1, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1Q9HCN8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDF2L1Q9HCN8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SDF2L1Q9HCN8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.17■□□□□ 0.5
SDF2L1Q9HCN8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.17■□□□□ 0.5
SDF2L1Q9HCN8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDF2L1Q9HCN8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDF2L1Q9HCN8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDF2L1Q9HCN8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDF2L1Q9HCN8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.16■□□□□ 0.5
SDF2L1Q9HCN8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.16■□□□□ 0.5
SDF2L1Q9HCN8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SDF2L1Q9HCN8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDF2L1Q9HCN8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SDF2L1Q9HCN8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.15■□□□□ 0.5
SDF2L1Q9HCN8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SDF2L1Q9HCN8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.15■□□□□ 0.5
SDF2L1Q9HCN8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.15■□□□□ 0.5
SDF2L1Q9HCN8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SDF2L1Q9HCN8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SDF2L1Q9HCN8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
SDF2L1Q9HCN8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SDF2L1Q9HCN8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SDF2L1Q9HCN8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SDF2L1Q9HCN8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SDF2L1Q9HCN8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SDF2L1Q9HCN8 LINC00526-201ENST00000581067 1875 ntBASIC18.14■□□□□ 0.49
SDF2L1Q9HCN8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SDF2L1Q9HCN8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SDF2L1Q9HCN8 AC127496.7-201ENST00000625110 1798 ntBASIC18.13■□□□□ 0.49
SDF2L1Q9HCN8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.13■□□□□ 0.49
SDF2L1Q9HCN8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
SDF2L1Q9HCN8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SDF2L1Q9HCN8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SDF2L1Q9HCN8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SDF2L1Q9HCN8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
SDF2L1Q9HCN8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.12■□□□□ 0.49
SDF2L1Q9HCN8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SDF2L1Q9HCN8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.12■□□□□ 0.49
SDF2L1Q9HCN8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 DUX4L29-201ENST00000425409 679 ntBASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SDF2L1Q9HCN8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.1■□□□□ 0.49
SDF2L1Q9HCN8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SDF2L1Q9HCN8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SDF2L1Q9HCN8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SDF2L1Q9HCN8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SDF2L1Q9HCN8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SDF2L1Q9HCN8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SDF2L1Q9HCN8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SDF2L1Q9HCN8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.1■□□□□ 0.49
SDF2L1Q9HCN8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SDF2L1Q9HCN8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SDF2L1Q9HCN8 AC007375.3-201ENST00000600936 2314 ntBASIC18.1■□□□□ 0.49
SDF2L1Q9HCN8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SDF2L1Q9HCN8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SDF2L1Q9HCN8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SDF2L1Q9HCN8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SDF2L1Q9HCN8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.09■□□□□ 0.49
SDF2L1Q9HCN8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.09■□□□□ 0.49
SDF2L1Q9HCN8 AC021231.2-201ENST00000594613 730 ntBASIC18.09■□□□□ 0.49
SDF2L1Q9HCN8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SDF2L1Q9HCN8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SDF2L1Q9HCN8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.09■□□□□ 0.49
SDF2L1Q9HCN8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SDF2L1Q9HCN8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SDF2L1Q9HCN8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SDF2L1Q9HCN8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
SDF2L1Q9HCN8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SDF2L1Q9HCN8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.08■□□□□ 0.48
SDF2L1Q9HCN8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SDF2L1Q9HCN8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SDF2L1Q9HCN8 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.08■□□□□ 0.48
SDF2L1Q9HCN8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SDF2L1Q9HCN8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SDF2L1Q9HCN8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.07■□□□□ 0.48
SDF2L1Q9HCN8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SDF2L1Q9HCN8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SDF2L1Q9HCN8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SDF2L1Q9HCN8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SDF2L1Q9HCN8 SLC25A24-204ENST00000569674 2357 ntBASIC18.06■□□□□ 0.48
SDF2L1Q9HCN8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.06■□□□□ 0.48
SDF2L1Q9HCN8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SDF2L1Q9HCN8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
SDF2L1Q9HCN8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SDF2L1Q9HCN8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SDF2L1Q9HCN8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms