Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SND1-IT1Q9HBX3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SND1-IT1Q9HBX3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SND1-IT1Q9HBX3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SND1-IT1Q9HBX3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SND1-IT1Q9HBX3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SND1-IT1Q9HBX3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SND1-IT1Q9HBX3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SND1-IT1Q9HBX3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SND1-IT1Q9HBX3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SND1-IT1Q9HBX3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC15.53■□□□□ 0.08
SND1-IT1Q9HBX3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SND1-IT1Q9HBX3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC15.53■□□□□ 0.08
SND1-IT1Q9HBX3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SND1-IT1Q9HBX3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SND1-IT1Q9HBX3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC15.53■□□□□ 0.08
SND1-IT1Q9HBX3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SND1-IT1Q9HBX3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SND1-IT1Q9HBX3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SND1-IT1Q9HBX3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SND1-IT1Q9HBX3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SND1-IT1Q9HBX3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC15.52■□□□□ 0.08
SND1-IT1Q9HBX3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC15.52■□□□□ 0.07
SND1-IT1Q9HBX3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SND1-IT1Q9HBX3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SND1-IT1Q9HBX3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SND1-IT1Q9HBX3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SND1-IT1Q9HBX3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SND1-IT1Q9HBX3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SND1-IT1Q9HBX3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
SND1-IT1Q9HBX3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SND1-IT1Q9HBX3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SND1-IT1Q9HBX3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.51■□□□□ 0.07
SND1-IT1Q9HBX3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SND1-IT1Q9HBX3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SND1-IT1Q9HBX3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SND1-IT1Q9HBX3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC15.5■□□□□ 0.07
SND1-IT1Q9HBX3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SND1-IT1Q9HBX3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.5■□□□□ 0.07
SND1-IT1Q9HBX3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SND1-IT1Q9HBX3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 AC004812.2-201ENST00000611079 2094 ntBASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SND1-IT1Q9HBX3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SND1-IT1Q9HBX3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SND1-IT1Q9HBX3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC15.48■□□□□ 0.07
SND1-IT1Q9HBX3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SND1-IT1Q9HBX3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC15.48■□□□□ 0.07
SND1-IT1Q9HBX3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC15.48■□□□□ 0.07
SND1-IT1Q9HBX3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SND1-IT1Q9HBX3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SND1-IT1Q9HBX3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SND1-IT1Q9HBX3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SND1-IT1Q9HBX3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.48■□□□□ 0.07
SND1-IT1Q9HBX3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SND1-IT1Q9HBX3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SND1-IT1Q9HBX3 HLA-V-202ENST00000446817 847 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms