Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF39Q9H2S5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.55■■□□□ 1.68
RNF39Q9H2S5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF39Q9H2S5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF39Q9H2S5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.54■■□□□ 1.68
RNF39Q9H2S5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF39Q9H2S5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF39Q9H2S5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RNF39Q9H2S5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.54■■□□□ 1.68
RNF39Q9H2S5 EIF2S2P5-201ENST00000457635 968 ntBASIC25.54■■□□□ 1.68
RNF39Q9H2S5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.54■■□□□ 1.68
RNF39Q9H2S5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.54■■□□□ 1.68
RNF39Q9H2S5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.54■■□□□ 1.68
RNF39Q9H2S5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RNF39Q9H2S5 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF39Q9H2S5 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.54■■□□□ 1.68
RNF39Q9H2S5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.53■■□□□ 1.68
RNF39Q9H2S5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.53■■□□□ 1.68
RNF39Q9H2S5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF39Q9H2S5 AF131216.4-201ENST00000638924 1588 ntBASIC25.52■■□□□ 1.68
RNF39Q9H2S5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
RNF39Q9H2S5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF39Q9H2S5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RNF39Q9H2S5 AL603841.1-201ENST00000430516 664 ntBASIC25.52■■□□□ 1.68
RNF39Q9H2S5 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
RNF39Q9H2S5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.52■■□□□ 1.68
RNF39Q9H2S5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF39Q9H2S5 KRT16P3-201ENST00000439127 1283 ntBASIC25.51■■□□□ 1.67
RNF39Q9H2S5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RNF39Q9H2S5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.51■■□□□ 1.67
RNF39Q9H2S5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.51■■□□□ 1.67
RNF39Q9H2S5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.51■■□□□ 1.67
RNF39Q9H2S5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.51■■□□□ 1.67
RNF39Q9H2S5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.51■■□□□ 1.67
RNF39Q9H2S5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF39Q9H2S5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.51■■□□□ 1.67
RNF39Q9H2S5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
RNF39Q9H2S5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF39Q9H2S5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RNF39Q9H2S5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.5■■□□□ 1.67
RNF39Q9H2S5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
RNF39Q9H2S5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.49■■□□□ 1.67
RNF39Q9H2S5 AC091060.1-201ENST00000623524 1766 ntBASIC25.49■■□□□ 1.67
RNF39Q9H2S5 AC090877.2-201ENST00000558441 1738 ntBASIC25.49■■□□□ 1.67
RNF39Q9H2S5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RNF39Q9H2S5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.49■■□□□ 1.67
RNF39Q9H2S5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.49■■□□□ 1.67
RNF39Q9H2S5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.49■■□□□ 1.67
RNF39Q9H2S5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF39Q9H2S5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF39Q9H2S5 SEC63P1-201ENST00000425785 1258 ntBASIC25.48■■□□□ 1.67
RNF39Q9H2S5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RNF39Q9H2S5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF39Q9H2S5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF39Q9H2S5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF39Q9H2S5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RNF39Q9H2S5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF39Q9H2S5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF39Q9H2S5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.47■■□□□ 1.67
RNF39Q9H2S5 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF39Q9H2S5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RNF39Q9H2S5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.46■■□□□ 1.67
RNF39Q9H2S5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.46■■□□□ 1.67
RNF39Q9H2S5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.46■■□□□ 1.67
RNF39Q9H2S5 AC017007.3-201ENST00000479865 435 ntBASIC25.46■■□□□ 1.67
RNF39Q9H2S5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.45■■□□□ 1.66
RNF39Q9H2S5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF39Q9H2S5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.45■■□□□ 1.66
RNF39Q9H2S5 DUSP8P4-201ENST00000399538 1761 ntBASIC25.45■■□□□ 1.66
RNF39Q9H2S5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.45■■□□□ 1.66
RNF39Q9H2S5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
RNF39Q9H2S5 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC25.44■■□□□ 1.66
RNF39Q9H2S5 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
RNF39Q9H2S5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RNF39Q9H2S5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF39Q9H2S5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF39Q9H2S5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.43■■□□□ 1.66
RNF39Q9H2S5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RNF39Q9H2S5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF39Q9H2S5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.42■■□□□ 1.66
RNF39Q9H2S5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF39Q9H2S5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.42■■□□□ 1.66
RNF39Q9H2S5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.42■■□□□ 1.66
RNF39Q9H2S5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF39Q9H2S5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
RNF39Q9H2S5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF39Q9H2S5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
RNF39Q9H2S5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.4■■□□□ 1.66
RNF39Q9H2S5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF39Q9H2S5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF39Q9H2S5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.4■■□□□ 1.66
RNF39Q9H2S5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.4■■□□□ 1.66
RNF39Q9H2S5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.4■■□□□ 1.66
RNF39Q9H2S5 AC010997.5-201ENST00000609182 354 ntBASIC25.4■■□□□ 1.66
RNF39Q9H2S5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.4■■□□□ 1.66
RNF39Q9H2S5 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC25.4■■□□□ 1.66
RNF39Q9H2S5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RNF39Q9H2S5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF39Q9H2S5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.39■■□□□ 1.66
RNF39Q9H2S5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms