Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCGF1Q9BSM1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCGF1Q9BSM1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCGF1Q9BSM1 AL592295.1-201ENST00000400984 884 ntBASIC19.44■□□□□ 0.7
PCGF1Q9BSM1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.44■□□□□ 0.7
PCGF1Q9BSM1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCGF1Q9BSM1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCGF1Q9BSM1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF1Q9BSM1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF1Q9BSM1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PCGF1Q9BSM1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PCGF1Q9BSM1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PCGF1Q9BSM1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCGF1Q9BSM1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.43■□□□□ 0.7
PCGF1Q9BSM1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF1Q9BSM1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF1Q9BSM1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
PCGF1Q9BSM1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCGF1Q9BSM1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.42■□□□□ 0.7
PCGF1Q9BSM1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCGF1Q9BSM1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCGF1Q9BSM1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.42■□□□□ 0.7
PCGF1Q9BSM1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCGF1Q9BSM1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCGF1Q9BSM1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCGF1Q9BSM1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCGF1Q9BSM1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.41■□□□□ 0.7
PCGF1Q9BSM1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCGF1Q9BSM1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCGF1Q9BSM1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF1Q9BSM1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.4■□□□□ 0.7
PCGF1Q9BSM1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF1Q9BSM1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF1Q9BSM1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF1Q9BSM1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF1Q9BSM1 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.4■□□□□ 0.7
PCGF1Q9BSM1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.4■□□□□ 0.7
PCGF1Q9BSM1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF1Q9BSM1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF1Q9BSM1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF1Q9BSM1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF1Q9BSM1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF1Q9BSM1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCGF1Q9BSM1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCGF1Q9BSM1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
PCGF1Q9BSM1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCGF1Q9BSM1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCGF1Q9BSM1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCGF1Q9BSM1 KRT18P24-201ENST00000344739 1156 ntBASIC19.39■□□□□ 0.69
PCGF1Q9BSM1 AC239859.2-201ENST00000444165 318 ntBASIC19.39■□□□□ 0.69
PCGF1Q9BSM1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.39■□□□□ 0.69
PCGF1Q9BSM1 AC120024.1-201ENST00000562672 995 ntBASIC19.39■□□□□ 0.69
PCGF1Q9BSM1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCGF1Q9BSM1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.69
PCGF1Q9BSM1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCGF1Q9BSM1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCGF1Q9BSM1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCGF1Q9BSM1 AC097639.1-201ENST00000565519 1891 ntBASIC19.39■□□□□ 0.69
PCGF1Q9BSM1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCGF1Q9BSM1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
PCGF1Q9BSM1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCGF1Q9BSM1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PCGF1Q9BSM1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PCGF1Q9BSM1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.38■□□□□ 0.69
PCGF1Q9BSM1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.38■□□□□ 0.69
PCGF1Q9BSM1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCGF1Q9BSM1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCGF1Q9BSM1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.38■□□□□ 0.69
PCGF1Q9BSM1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.38■□□□□ 0.69
PCGF1Q9BSM1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF1Q9BSM1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF1Q9BSM1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF1Q9BSM1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.37■□□□□ 0.69
PCGF1Q9BSM1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF1Q9BSM1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF1Q9BSM1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF1Q9BSM1 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.37■□□□□ 0.69
PCGF1Q9BSM1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PCGF1Q9BSM1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF1Q9BSM1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.37■□□□□ 0.69
PCGF1Q9BSM1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.37■□□□□ 0.69
PCGF1Q9BSM1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCGF1Q9BSM1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCGF1Q9BSM1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCGF1Q9BSM1 FOXO3B-201ENST00000395675 1928 ntBASIC19.36■□□□□ 0.69
PCGF1Q9BSM1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCGF1Q9BSM1 BX664725.1-201ENST00000438252 379 ntBASIC19.36■□□□□ 0.69
PCGF1Q9BSM1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
PCGF1Q9BSM1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCGF1Q9BSM1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.35■□□□□ 0.69
PCGF1Q9BSM1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCGF1Q9BSM1 KRT125P-201ENST00000546827 989 ntBASIC19.35■□□□□ 0.69
PCGF1Q9BSM1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCGF1Q9BSM1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCGF1Q9BSM1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCGF1Q9BSM1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCGF1Q9BSM1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCGF1Q9BSM1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.35■□□□□ 0.69
PCGF1Q9BSM1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCGF1Q9BSM1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms