Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
NR1H4Q96RI1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.93■■□□□ 1.1
NR1H4Q96RI1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
NR1H4Q96RI1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NR1H4Q96RI1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NR1H4Q96RI1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.93■■□□□ 1.1
NR1H4Q96RI1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NR1H4Q96RI1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NR1H4Q96RI1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.92■■□□□ 1.1
NR1H4Q96RI1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
NR1H4Q96RI1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NR1H4Q96RI1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NR1H4Q96RI1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.92■■□□□ 1.1
NR1H4Q96RI1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NR1H4Q96RI1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NR1H4Q96RI1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.91■■□□□ 1.1
NR1H4Q96RI1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.91■■□□□ 1.1
NR1H4Q96RI1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.91■■□□□ 1.1
NR1H4Q96RI1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
NR1H4Q96RI1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NR1H4Q96RI1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NR1H4Q96RI1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NR1H4Q96RI1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.9■■□□□ 1.1
NR1H4Q96RI1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NR1H4Q96RI1 DUSP8P3-201ENST00000399571 1760 ntBASIC21.9■■□□□ 1.1
NR1H4Q96RI1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NR1H4Q96RI1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NR1H4Q96RI1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.9■■□□□ 1.1
NR1H4Q96RI1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
NR1H4Q96RI1 FOXO3B-201ENST00000395675 1928 ntBASIC21.9■■□□□ 1.1
NR1H4Q96RI1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
NR1H4Q96RI1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NR1H4Q96RI1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NR1H4Q96RI1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NR1H4Q96RI1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NR1H4Q96RI1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.89■■□□□ 1.1
NR1H4Q96RI1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NR1H4Q96RI1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NR1H4Q96RI1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
NR1H4Q96RI1 MIR762-201ENST00000390236 83 ntBASIC21.89■■□□□ 1.09
NR1H4Q96RI1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.89■■□□□ 1.09
NR1H4Q96RI1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NR1H4Q96RI1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
NR1H4Q96RI1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
NR1H4Q96RI1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.89■■□□□ 1.09
NR1H4Q96RI1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NR1H4Q96RI1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.89■■□□□ 1.09
NR1H4Q96RI1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NR1H4Q96RI1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NR1H4Q96RI1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NR1H4Q96RI1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NR1H4Q96RI1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NR1H4Q96RI1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NR1H4Q96RI1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.88■■□□□ 1.09
NR1H4Q96RI1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.88■■□□□ 1.09
NR1H4Q96RI1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NR1H4Q96RI1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
NR1H4Q96RI1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NR1H4Q96RI1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
NR1H4Q96RI1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NR1H4Q96RI1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NR1H4Q96RI1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NR1H4Q96RI1 ECEL1P1-201ENST00000373592 1742 ntBASIC21.87■■□□□ 1.09
NR1H4Q96RI1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NR1H4Q96RI1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.87■■□□□ 1.09
NR1H4Q96RI1 AL121603.2-201ENST00000557373 2117 ntBASIC21.87■■□□□ 1.09
NR1H4Q96RI1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NR1H4Q96RI1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
NR1H4Q96RI1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NR1H4Q96RI1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
NR1H4Q96RI1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
NR1H4Q96RI1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NR1H4Q96RI1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NR1H4Q96RI1 GUSBP5-202ENST00000510805 1989 ntBASIC21.87■■□□□ 1.09
NR1H4Q96RI1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.87■■□□□ 1.09
NR1H4Q96RI1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
NR1H4Q96RI1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
NR1H4Q96RI1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
NR1H4Q96RI1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NR1H4Q96RI1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
NR1H4Q96RI1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NR1H4Q96RI1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
NR1H4Q96RI1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NR1H4Q96RI1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.85■■□□□ 1.09
NR1H4Q96RI1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.85■■□□□ 1.09
NR1H4Q96RI1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.85■■□□□ 1.09
NR1H4Q96RI1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NR1H4Q96RI1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.85■■□□□ 1.09
NR1H4Q96RI1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.85■■□□□ 1.09
NR1H4Q96RI1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NR1H4Q96RI1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
NR1H4Q96RI1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
NR1H4Q96RI1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
NR1H4Q96RI1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NR1H4Q96RI1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
NR1H4Q96RI1 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.84■■□□□ 1.09
NR1H4Q96RI1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
NR1H4Q96RI1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
NR1H4Q96RI1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NR1H4Q96RI1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms