Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.49■□□□□ 0.39
AP1S3Q96PC3 AC021231.2-201ENST00000594613 730 ntBASIC17.49■□□□□ 0.39
AP1S3Q96PC3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S3Q96PC3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S3Q96PC3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S3Q96PC3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S3Q96PC3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S3Q96PC3 AL139125.2-201ENST00000623134 1869 ntBASIC17.48■□□□□ 0.39
AP1S3Q96PC3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
AP1S3Q96PC3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S3Q96PC3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S3Q96PC3 AL162393.1-201ENST00000437852 946 ntBASIC17.47■□□□□ 0.39
AP1S3Q96PC3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
AP1S3Q96PC3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP1S3Q96PC3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
AP1S3Q96PC3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S3Q96PC3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.46■□□□□ 0.39
AP1S3Q96PC3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
AP1S3Q96PC3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S3Q96PC3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S3Q96PC3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S3Q96PC3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP1S3Q96PC3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
AP1S3Q96PC3 AC096887.2-201ENST00000623443 1957 ntBASIC17.46■□□□□ 0.39
AP1S3Q96PC3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
AP1S3Q96PC3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.45■□□□□ 0.38
AP1S3Q96PC3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
AP1S3Q96PC3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP1S3Q96PC3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.45■□□□□ 0.38
AP1S3Q96PC3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP1S3Q96PC3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.45■□□□□ 0.38
AP1S3Q96PC3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP1S3Q96PC3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP1S3Q96PC3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.45■□□□□ 0.38
AP1S3Q96PC3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.45■□□□□ 0.38
AP1S3Q96PC3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
AP1S3Q96PC3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP1S3Q96PC3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP1S3Q96PC3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP1S3Q96PC3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP1S3Q96PC3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP1S3Q96PC3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
AP1S3Q96PC3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP1S3Q96PC3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP1S3Q96PC3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP1S3Q96PC3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP1S3Q96PC3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP1S3Q96PC3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
AP1S3Q96PC3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.44■□□□□ 0.38
AP1S3Q96PC3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.44■□□□□ 0.38
AP1S3Q96PC3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP1S3Q96PC3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
AP1S3Q96PC3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP1S3Q96PC3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP1S3Q96PC3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP1S3Q96PC3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP1S3Q96PC3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP1S3Q96PC3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP1S3Q96PC3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
AP1S3Q96PC3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP1S3Q96PC3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
AP1S3Q96PC3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP1S3Q96PC3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP1S3Q96PC3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.43■□□□□ 0.38
AP1S3Q96PC3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP1S3Q96PC3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP1S3Q96PC3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP1S3Q96PC3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP1S3Q96PC3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S3Q96PC3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
AP1S3Q96PC3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
AP1S3Q96PC3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S3Q96PC3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S3Q96PC3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.42■□□□□ 0.38
AP1S3Q96PC3 AC008813.1-201ENST00000536597 885 ntBASIC17.42■□□□□ 0.38
AP1S3Q96PC3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S3Q96PC3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S3Q96PC3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.42■□□□□ 0.38
AP1S3Q96PC3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S3Q96PC3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S3Q96PC3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.41■□□□□ 0.38
AP1S3Q96PC3 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.41■□□□□ 0.38
AP1S3Q96PC3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.41■□□□□ 0.38
AP1S3Q96PC3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S3Q96PC3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms