Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CHMP6Q96FZ7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHMP6Q96FZ7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CHMP6Q96FZ7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.39■■□□□ 1.33
CHMP6Q96FZ7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHMP6Q96FZ7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHMP6Q96FZ7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHMP6Q96FZ7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CHMP6Q96FZ7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
CHMP6Q96FZ7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHMP6Q96FZ7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CHMP6Q96FZ7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CHMP6Q96FZ7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHMP6Q96FZ7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHMP6Q96FZ7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.39■■□□□ 1.33
CHMP6Q96FZ7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
CHMP6Q96FZ7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
CHMP6Q96FZ7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CHMP6Q96FZ7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHMP6Q96FZ7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHMP6Q96FZ7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHMP6Q96FZ7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHMP6Q96FZ7 ZNRF2P2-203ENST00000454624 420 ntBASIC23.38■■□□□ 1.33
CHMP6Q96FZ7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CHMP6Q96FZ7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHMP6Q96FZ7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHMP6Q96FZ7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.38■■□□□ 1.33
CHMP6Q96FZ7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHMP6Q96FZ7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.37■■□□□ 1.33
CHMP6Q96FZ7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.37■■□□□ 1.33
CHMP6Q96FZ7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHMP6Q96FZ7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.37■■□□□ 1.33
CHMP6Q96FZ7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHMP6Q96FZ7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
CHMP6Q96FZ7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CHMP6Q96FZ7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHMP6Q96FZ7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.36■■□□□ 1.33
CHMP6Q96FZ7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHMP6Q96FZ7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHMP6Q96FZ7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CHMP6Q96FZ7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHMP6Q96FZ7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.35■■□□□ 1.33
CHMP6Q96FZ7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CHMP6Q96FZ7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHMP6Q96FZ7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHMP6Q96FZ7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.35■■□□□ 1.33
CHMP6Q96FZ7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHMP6Q96FZ7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.35■■□□□ 1.33
CHMP6Q96FZ7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
CHMP6Q96FZ7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHMP6Q96FZ7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHMP6Q96FZ7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHMP6Q96FZ7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
CHMP6Q96FZ7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHMP6Q96FZ7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHMP6Q96FZ7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHMP6Q96FZ7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.34■■□□□ 1.33
CHMP6Q96FZ7 AL359504.2-201ENST00000605506 1601 ntBASIC23.33■■□□□ 1.33
CHMP6Q96FZ7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CHMP6Q96FZ7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHMP6Q96FZ7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHMP6Q96FZ7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHMP6Q96FZ7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHMP6Q96FZ7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
CHMP6Q96FZ7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.33■■□□□ 1.33
CHMP6Q96FZ7 DUX4L11-201ENST00000611504 1267 ntBASIC23.33■■□□□ 1.33
CHMP6Q96FZ7 DUX4L12-201ENST00000614593 1267 ntBASIC23.33■■□□□ 1.33
CHMP6Q96FZ7 DUX4L14-201ENST00000621227 1267 ntBASIC23.33■■□□□ 1.33
CHMP6Q96FZ7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHMP6Q96FZ7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.33■■□□□ 1.33
CHMP6Q96FZ7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHMP6Q96FZ7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.32■■□□□ 1.32
CHMP6Q96FZ7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CHMP6Q96FZ7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.32■■□□□ 1.32
CHMP6Q96FZ7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
CHMP6Q96FZ7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHMP6Q96FZ7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.32■■□□□ 1.32
CHMP6Q96FZ7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 DUX4L13-201ENST00000554103 1267 ntBASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 DUX4L15-201ENST00000611059 1267 ntBASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 DUX4L23-201ENST00000615195 1269 ntBASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 DUX4L24-201ENST00000617576 1269 ntBASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 DUX4L22-201ENST00000618238 1269 ntBASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 DUX4L20-201ENST00000619712 1269 ntBASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 DUX4L21-201ENST00000622058 1269 ntBASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 DUX4L10-201ENST00000622460 1267 ntBASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 DUX4L25-201ENST00000624915 1269 ntBASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP6Q96FZ7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.3■■□□□ 1.32
CHMP6Q96FZ7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.3■■□□□ 1.32
CHMP6Q96FZ7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHMP6Q96FZ7 ABHD17AP4-201ENST00000411545 909 ntBASIC23.3■■□□□ 1.32
CHMP6Q96FZ7 MIR6089-201ENST00000616698 64 ntBASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms