Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC46Q96FV0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC46Q96FV0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.84■□□□□ 0.93
LRRC46Q96FV0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.84■□□□□ 0.93
LRRC46Q96FV0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LRRC46Q96FV0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC46Q96FV0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.83■□□□□ 0.93
LRRC46Q96FV0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC46Q96FV0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LRRC46Q96FV0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC46Q96FV0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.83■□□□□ 0.93
LRRC46Q96FV0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.83■□□□□ 0.93
LRRC46Q96FV0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.83■□□□□ 0.93
LRRC46Q96FV0 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.83■□□□□ 0.93
LRRC46Q96FV0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
LRRC46Q96FV0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRC46Q96FV0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LRRC46Q96FV0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
LRRC46Q96FV0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
LRRC46Q96FV0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC46Q96FV0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC46Q96FV0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.82■□□□□ 0.92
LRRC46Q96FV0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC46Q96FV0 AC010997.5-201ENST00000609182 354 ntBASIC20.82■□□□□ 0.92
LRRC46Q96FV0 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.82■□□□□ 0.92
LRRC46Q96FV0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC46Q96FV0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC46Q96FV0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC46Q96FV0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.81■□□□□ 0.92
LRRC46Q96FV0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LRRC46Q96FV0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC46Q96FV0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LRRC46Q96FV0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC46Q96FV0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC46Q96FV0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC46Q96FV0 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.8■□□□□ 0.92
LRRC46Q96FV0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC46Q96FV0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC46Q96FV0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
LRRC46Q96FV0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC46Q96FV0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC46Q96FV0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC46Q96FV0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC46Q96FV0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC46Q96FV0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC46Q96FV0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC46Q96FV0 AL356740.2-201ENST00000601559 647 ntBASIC20.79■□□□□ 0.92
LRRC46Q96FV0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC46Q96FV0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC46Q96FV0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC46Q96FV0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC46Q96FV0 AC020928.2-201ENST00000588717 2197 ntBASIC20.79■□□□□ 0.92
LRRC46Q96FV0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC46Q96FV0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRC46Q96FV0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRC46Q96FV0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC46Q96FV0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRC46Q96FV0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LRRC46Q96FV0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRC46Q96FV0 MIR6724-1-201ENST00000616420 92 ntBASIC20.78■□□□□ 0.92
LRRC46Q96FV0 MIR6724-2-201ENST00000616483 92 ntBASIC20.78■□□□□ 0.92
LRRC46Q96FV0 MIR6724-4-201ENST00000617390 92 ntBASIC20.78■□□□□ 0.92
LRRC46Q96FV0 MIR6724-3-201ENST00000622482 92 ntBASIC20.78■□□□□ 0.92
LRRC46Q96FV0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRC46Q96FV0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRC46Q96FV0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC46Q96FV0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC46Q96FV0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC46Q96FV0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC46Q96FV0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRC46Q96FV0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.77■□□□□ 0.92
LRRC46Q96FV0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LRRC46Q96FV0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC46Q96FV0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.77■□□□□ 0.92
LRRC46Q96FV0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.76■□□□□ 0.91
LRRC46Q96FV0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC46Q96FV0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC46Q96FV0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.76■□□□□ 0.91
LRRC46Q96FV0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.76■□□□□ 0.91
LRRC46Q96FV0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.76■□□□□ 0.91
LRRC46Q96FV0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.76■□□□□ 0.91
LRRC46Q96FV0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC46Q96FV0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
LRRC46Q96FV0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC46Q96FV0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC46Q96FV0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.76■□□□□ 0.91
LRRC46Q96FV0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LRRC46Q96FV0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.75■□□□□ 0.91
LRRC46Q96FV0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC46Q96FV0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC46Q96FV0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.75■□□□□ 0.91
LRRC46Q96FV0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRC46Q96FV0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC46Q96FV0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LRRC46Q96FV0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC46Q96FV0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC46Q96FV0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC46Q96FV0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC46Q96FV0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC46Q96FV0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms