Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
RNF25Q96BH1 LINC00543-201ENST00000567234 1845 ntBASIC24.44■■□□□ 1.5
RNF25Q96BH1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.44■■□□□ 1.5
RNF25Q96BH1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
RNF25Q96BH1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF25Q96BH1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF25Q96BH1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF25Q96BH1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
RNF25Q96BH1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF25Q96BH1 RARRES2P2-201ENST00000394842 485 ntBASIC24.42■■□□□ 1.5
RNF25Q96BH1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF25Q96BH1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF25Q96BH1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF25Q96BH1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF25Q96BH1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.41■■□□□ 1.5
RNF25Q96BH1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.41■■□□□ 1.5
RNF25Q96BH1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF25Q96BH1 HSD17B1P1-201ENST00000590052 955 ntBASIC24.41■■□□□ 1.5
RNF25Q96BH1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
RNF25Q96BH1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
RNF25Q96BH1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
RNF25Q96BH1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF25Q96BH1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.4■■□□□ 1.5
RNF25Q96BH1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF25Q96BH1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF25Q96BH1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF25Q96BH1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.4■■□□□ 1.5
RNF25Q96BH1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF25Q96BH1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RNF25Q96BH1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RNF25Q96BH1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
RNF25Q96BH1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RNF25Q96BH1 AC018755.3-202ENST00000596210 929 ntBASIC24.39■■□□□ 1.49
RNF25Q96BH1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
RNF25Q96BH1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF25Q96BH1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
RNF25Q96BH1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
RNF25Q96BH1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RNF25Q96BH1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF25Q96BH1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF25Q96BH1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF25Q96BH1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.37■■□□□ 1.49
RNF25Q96BH1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF25Q96BH1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF25Q96BH1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
RNF25Q96BH1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
RNF25Q96BH1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF25Q96BH1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF25Q96BH1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF25Q96BH1 HLA-L-211ENST00000482052 1765 ntBASIC24.37■■□□□ 1.49
RNF25Q96BH1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.36■■□□□ 1.49
RNF25Q96BH1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF25Q96BH1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF25Q96BH1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF25Q96BH1 RPS2P7-201ENST00000447334 885 ntBASIC24.36■■□□□ 1.49
RNF25Q96BH1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
RNF25Q96BH1 U85056.1-201ENST00000616429 682 ntBASIC24.36■■□□□ 1.49
RNF25Q96BH1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF25Q96BH1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF25Q96BH1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.36■■□□□ 1.49
RNF25Q96BH1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF25Q96BH1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF25Q96BH1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.35■■□□□ 1.49
RNF25Q96BH1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF25Q96BH1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF25Q96BH1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
RNF25Q96BH1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
RNF25Q96BH1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF25Q96BH1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF25Q96BH1 AC141586.4-201ENST00000624558 1573 ntBASIC24.34■■□□□ 1.49
RNF25Q96BH1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.34■■□□□ 1.49
RNF25Q96BH1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RNF25Q96BH1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF25Q96BH1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
RNF25Q96BH1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.34■■□□□ 1.49
RNF25Q96BH1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF25Q96BH1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.34■■□□□ 1.49
RNF25Q96BH1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
RNF25Q96BH1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF25Q96BH1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF25Q96BH1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF25Q96BH1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RNF25Q96BH1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RNF25Q96BH1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RNF25Q96BH1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF25Q96BH1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF25Q96BH1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF25Q96BH1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.33■■□□□ 1.49
RNF25Q96BH1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.33■■□□□ 1.49
RNF25Q96BH1 DUX4L9-201ENST00000449051 1259 ntBASIC24.33■■□□□ 1.49
RNF25Q96BH1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.33■■□□□ 1.49
RNF25Q96BH1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
RNF25Q96BH1 AC004812.2-201ENST00000611079 2094 ntBASIC24.33■■□□□ 1.48
RNF25Q96BH1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF25Q96BH1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF25Q96BH1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF25Q96BH1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF25Q96BH1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RNF25Q96BH1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
RNF25Q96BH1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms