Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SH3RF3Q8TEJ3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC27.97■■■□□ 2.07
SH3RF3Q8TEJ3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
SH3RF3Q8TEJ3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SH3RF3Q8TEJ3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
SH3RF3Q8TEJ3 SLC6A10P-202ENST00000431994 2058 ntBASIC27.96■■■□□ 2.07
SH3RF3Q8TEJ3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SH3RF3Q8TEJ3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
SH3RF3Q8TEJ3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC27.96■■■□□ 2.07
SH3RF3Q8TEJ3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
SH3RF3Q8TEJ3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SH3RF3Q8TEJ3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
SH3RF3Q8TEJ3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC27.96■■■□□ 2.07
SH3RF3Q8TEJ3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
SH3RF3Q8TEJ3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
SH3RF3Q8TEJ3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
SH3RF3Q8TEJ3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.95■■■□□ 2.06
SH3RF3Q8TEJ3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.95■■■□□ 2.06
SH3RF3Q8TEJ3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.95■■■□□ 2.06
SH3RF3Q8TEJ3 AC145676.1-201ENST00000514988 2004 ntBASIC27.95■■■□□ 2.06
SH3RF3Q8TEJ3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.94■■■□□ 2.06
SH3RF3Q8TEJ3 MIR6724-1-201ENST00000616420 92 ntBASIC27.94■■■□□ 2.06
SH3RF3Q8TEJ3 MIR6724-2-201ENST00000616483 92 ntBASIC27.94■■■□□ 2.06
SH3RF3Q8TEJ3 MIR6724-4-201ENST00000617390 92 ntBASIC27.94■■■□□ 2.06
SH3RF3Q8TEJ3 MIR6724-3-201ENST00000622482 92 ntBASIC27.94■■■□□ 2.06
SH3RF3Q8TEJ3 AL117332.1-201ENST00000622628 974 ntBASIC27.94■■■□□ 2.06
SH3RF3Q8TEJ3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SH3RF3Q8TEJ3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.93■■■□□ 2.06
SH3RF3Q8TEJ3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SH3RF3Q8TEJ3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.92■■■□□ 2.06
SH3RF3Q8TEJ3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.92■■■□□ 2.06
SH3RF3Q8TEJ3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC27.92■■■□□ 2.06
SH3RF3Q8TEJ3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.92■■■□□ 2.06
SH3RF3Q8TEJ3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.92■■■□□ 2.06
SH3RF3Q8TEJ3 SNX5-217ENST00000606557 1087 ntBASIC27.92■■■□□ 2.06
SH3RF3Q8TEJ3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
SH3RF3Q8TEJ3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
SH3RF3Q8TEJ3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC27.91■■■□□ 2.06
SH3RF3Q8TEJ3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
SH3RF3Q8TEJ3 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.91■■■□□ 2.06
SH3RF3Q8TEJ3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.91■■■□□ 2.06
SH3RF3Q8TEJ3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
SH3RF3Q8TEJ3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.91■■■□□ 2.06
SH3RF3Q8TEJ3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC27.91■■■□□ 2.06
SH3RF3Q8TEJ3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.9■■■□□ 2.06
SH3RF3Q8TEJ3 AC131281.2-201ENST00000520478 145 ntBASIC27.9■■■□□ 2.06
SH3RF3Q8TEJ3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC27.9■■■□□ 2.06
SH3RF3Q8TEJ3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.9■■■□□ 2.06
SH3RF3Q8TEJ3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.9■■■□□ 2.06
SH3RF3Q8TEJ3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
SH3RF3Q8TEJ3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.89■■■□□ 2.06
SH3RF3Q8TEJ3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
SH3RF3Q8TEJ3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
SH3RF3Q8TEJ3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.89■■■□□ 2.06
SH3RF3Q8TEJ3 MIR3621-201ENST00000580529 85 ntBASIC27.89■■■□□ 2.06
SH3RF3Q8TEJ3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
SH3RF3Q8TEJ3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.89■■■□□ 2.06
SH3RF3Q8TEJ3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
SH3RF3Q8TEJ3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
SH3RF3Q8TEJ3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
SH3RF3Q8TEJ3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
SH3RF3Q8TEJ3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
SH3RF3Q8TEJ3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
SH3RF3Q8TEJ3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
SH3RF3Q8TEJ3 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.88■■■□□ 2.05
SH3RF3Q8TEJ3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
SH3RF3Q8TEJ3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
SH3RF3Q8TEJ3 LBH-205ENST00000407930 756 ntTSL 2 BASIC27.88■■■□□ 2.05
SH3RF3Q8TEJ3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.88■■■□□ 2.05
SH3RF3Q8TEJ3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.88■■■□□ 2.05
SH3RF3Q8TEJ3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC27.87■■■□□ 2.05
SH3RF3Q8TEJ3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
SH3RF3Q8TEJ3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC27.87■■■□□ 2.05
SH3RF3Q8TEJ3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
SH3RF3Q8TEJ3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.87■■■□□ 2.05
SH3RF3Q8TEJ3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.87■■■□□ 2.05
SH3RF3Q8TEJ3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.87■■■□□ 2.05
SH3RF3Q8TEJ3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SH3RF3Q8TEJ3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.86■■■□□ 2.05
SH3RF3Q8TEJ3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
SH3RF3Q8TEJ3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SH3RF3Q8TEJ3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
SH3RF3Q8TEJ3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
SH3RF3Q8TEJ3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
SH3RF3Q8TEJ3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC27.86■■■□□ 2.05
SH3RF3Q8TEJ3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SH3RF3Q8TEJ3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SH3RF3Q8TEJ3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC27.85■■■□□ 2.05
SH3RF3Q8TEJ3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.85■■■□□ 2.05
SH3RF3Q8TEJ3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SH3RF3Q8TEJ3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SH3RF3Q8TEJ3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
SH3RF3Q8TEJ3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SH3RF3Q8TEJ3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
SH3RF3Q8TEJ3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
SH3RF3Q8TEJ3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC27.83■■■□□ 2.05
SH3RF3Q8TEJ3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.83■■■□□ 2.05
SH3RF3Q8TEJ3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.83■■■□□ 2.05
SH3RF3Q8TEJ3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.82■■■□□ 2.04
SH3RF3Q8TEJ3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.82■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms