Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RNF44Q7L0R7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF44Q7L0R7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF44Q7L0R7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
RNF44Q7L0R7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF44Q7L0R7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF44Q7L0R7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF44Q7L0R7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.35■■□□□ 1.17
RNF44Q7L0R7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RNF44Q7L0R7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
RNF44Q7L0R7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF44Q7L0R7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.35■■□□□ 1.17
RNF44Q7L0R7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.35■■□□□ 1.17
RNF44Q7L0R7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.35■■□□□ 1.17
RNF44Q7L0R7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF44Q7L0R7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF44Q7L0R7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF44Q7L0R7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF44Q7L0R7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF44Q7L0R7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RNF44Q7L0R7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF44Q7L0R7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
RNF44Q7L0R7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF44Q7L0R7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RNF44Q7L0R7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF44Q7L0R7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF44Q7L0R7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF44Q7L0R7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF44Q7L0R7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF44Q7L0R7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF44Q7L0R7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF44Q7L0R7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF44Q7L0R7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.33■■□□□ 1.17
RNF44Q7L0R7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.33■■□□□ 1.17
RNF44Q7L0R7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
RNF44Q7L0R7 BX664725.1-201ENST00000438252 379 ntBASIC22.33■■□□□ 1.17
RNF44Q7L0R7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF44Q7L0R7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF44Q7L0R7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.33■■□□□ 1.16
RNF44Q7L0R7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
RNF44Q7L0R7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF44Q7L0R7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF44Q7L0R7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
RNF44Q7L0R7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.32■■□□□ 1.16
RNF44Q7L0R7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF44Q7L0R7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF44Q7L0R7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
RNF44Q7L0R7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF44Q7L0R7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
RNF44Q7L0R7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF44Q7L0R7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF44Q7L0R7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF44Q7L0R7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF44Q7L0R7 AF131216.4-201ENST00000638924 1588 ntBASIC22.31■■□□□ 1.16
RNF44Q7L0R7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF44Q7L0R7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF44Q7L0R7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF44Q7L0R7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF44Q7L0R7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF44Q7L0R7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF44Q7L0R7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF44Q7L0R7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF44Q7L0R7 AC022211.4-201ENST00000625094 2161 ntBASIC22.31■■□□□ 1.16
RNF44Q7L0R7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF44Q7L0R7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF44Q7L0R7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
RNF44Q7L0R7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF44Q7L0R7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF44Q7L0R7 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF44Q7L0R7 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.3■■□□□ 1.16
RNF44Q7L0R7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF44Q7L0R7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF44Q7L0R7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF44Q7L0R7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF44Q7L0R7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF44Q7L0R7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF44Q7L0R7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF44Q7L0R7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF44Q7L0R7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF44Q7L0R7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF44Q7L0R7 AC239859.2-201ENST00000444165 318 ntBASIC22.29■■□□□ 1.16
RNF44Q7L0R7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF44Q7L0R7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF44Q7L0R7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.29■■□□□ 1.16
RNF44Q7L0R7 AC020928.2-201ENST00000588717 2197 ntBASIC22.29■■□□□ 1.16
RNF44Q7L0R7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF44Q7L0R7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF44Q7L0R7 AC021242.3-201ENST00000607598 1377 ntBASIC22.28■■□□□ 1.16
RNF44Q7L0R7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF44Q7L0R7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF44Q7L0R7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.28■■□□□ 1.16
RNF44Q7L0R7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RNF44Q7L0R7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF44Q7L0R7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RNF44Q7L0R7 KRT125P-201ENST00000546827 989 ntBASIC22.27■■□□□ 1.16
RNF44Q7L0R7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.27■■□□□ 1.16
RNF44Q7L0R7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF44Q7L0R7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF44Q7L0R7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF44Q7L0R7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms