Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 PIP4K2C-201ENST00000354947 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.547e-7■■■■□ 25.6
SND1Q7KZF4 FKBP9-203ENST00000463443 377 ntTSL 211.09□□□□□ -0.637e-7■■■■□ 25.6
SND1Q7KZF4 DPP4-210ENST00000497461 781 ntTSL 1 (best)11.05□□□□□ -0.649e-9■■■■□ 25.6
SND1Q7KZF4 ESYT1-208ENST00000550986 543 ntTSL 410.43□□□□□ -0.742e-9■■■■□ 25.6
SND1Q7KZF4 FKBP9-211ENST00000489038 781 ntTSL 310.05□□□□□ -0.87e-7■■■■□ 25.6
SND1Q7KZF4 GGH-202ENST00000518113 703 ntTSL 39.43□□□□□ -0.95e-8■■■■□ 25.6
SND1Q7KZF4 KIAA0319L-206ENST00000461312 670 ntTSL 59.19□□□□□ -0.949e-8■■■■□ 25.6
SND1Q7KZF4 SLC2A3-203ENST00000476634 763 ntTSL 29.11□□□□□ -0.951e-8■■■■□ 25.6
SND1Q7KZF4 DPP4-203ENST00000416189 527 ntTSL 58.47□□□□□ -1.059e-9■■■■□ 25.6
SND1Q7KZF4 CD99L2-209ENST00000634795 590 ntAPPRIS ALT2 TSL 57.72□□□□□ -1.177e-7■■■■□ 25.6
SND1Q7KZF4 TTC13-206ENST00000486879 492 ntTSL 57.18□□□□□ -1.267e-7■■■■□ 25.6
SND1Q7KZF4 KDELC1-203ENST00000484943 683 ntTSL 57.11□□□□□ -1.277e-7■■■■□ 25.6
SND1Q7KZF4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.37e-7■■■■□ 25.6
SND1Q7KZF4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.347e-7■■■■□ 25.6
SND1Q7KZF4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.57■■□□□ 1.049e-10■■■■□ 25.5
SND1Q7KZF4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.039e-10■■■■□ 25.5
SND1Q7KZF4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.99■□□□□ 0.799e-10■■■■□ 25.5
SND1Q7KZF4 SCARB1-205ENST00000538291 5527 ntTSL 518.53■□□□□ 0.569e-10■■■■□ 25.5
SND1Q7KZF4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.08■□□□□ 0.499e-10■■■■□ 25.5
SND1Q7KZF4 ASNS-208ENST00000442734 828 ntTSL 216.49■□□□□ 0.239e-10■■■■□ 25.5
SND1Q7KZF4 CES1-207ENST00000565568 659 ntTSL 515.7■□□□□ 0.13e-14■■■■□ 25.5
SND1Q7KZF4 CFB-284ENST00000498317 589 ntTSL 28.83□□□□□ -11e-12■■■■□ 25.5
SND1Q7KZF4 TMEM9-206ENST00000435310 507 ntTSL 216.82■□□□□ 0.284e-9■■■■□ 25.5
SND1Q7KZF4 TMEM9-205ENST00000414605 545 ntTSL 211.2□□□□□ -0.624e-9■■■■□ 25.5
SND1Q7KZF4 GSN-212ENST00000477863 716 ntTSL 416.43■□□□□ 0.221e-14■■■■□ 25.5
SND1Q7KZF4 PPT1-201ENST00000372775 563 ntTSL 36.87□□□□□ -1.314e-9■■■■□ 25.5
SND1Q7KZF4 APOH-202ENST00000577982 707 ntTSL 54.61□□□□□ -1.674e-37■■■■□ 25.5
SND1Q7KZF4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.92■□□□□ 0.32e-6■■■■□ 25.5
SND1Q7KZF4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.212e-6■■■■□ 25.5
SND1Q7KZF4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.2■□□□□ 0.182e-6■■■■□ 25.5
SND1Q7KZF4 GAK-211ENST00000509566 3126 ntTSL 215.88■□□□□ 0.132e-6■■■■□ 25.5
SND1Q7KZF4 GAK-221ENST00000515868 3903 ntTSL 213.74□□□□□ -0.212e-6■■■■□ 25.5
SND1Q7KZF4 TMED10-203ENST00000555085 553 ntTSL 213.67□□□□□ -0.225e-8■■■■□ 25.5
SND1Q7KZF4 GSN-210ENST00000477104 806 ntTSL 415.72■□□□□ 0.111e-14■■■■□ 25.4
SND1Q7KZF4 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.972e-12■■■■□ 25.4
SND1Q7KZF4 SLC1A2-206ENST00000479543 564 ntTSL 513.95□□□□□ -0.183e-8■■■■□ 25.4
SND1Q7KZF4 APLP2-217ENST00000533195 560 ntTSL 421.54■■□□□ 1.042e-11■■■■□ 25.4
SND1Q7KZF4 APLP2-216ENST00000532456 664 ntTSL 420.05■□□□□ 0.82e-11■■■■□ 25.4
SND1Q7KZF4 APLP2-206ENST00000525215 478 ntTSL 28.18□□□□□ -1.12e-11■■■■□ 25.4
SND1Q7KZF4 CTSB-211ENST00000526481 660 ntTSL 515.04■□□□□ -04e-19■■■■□ 25.4
SND1Q7KZF4 EBP-202ENST00000414061 609 ntTSL 314.46□□□□□ -0.091e-9■■■■□ 25.4
SND1Q7KZF4 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11e-7■■■■□ 25.4
SND1Q7KZF4 FRRS1-204ENST00000492943 440 ntTSL 58.47□□□□□ -1.052e-6■■■■□ 25.4
SND1Q7KZF4 CYBA-203ENST00000562209 624 ntTSL 520■□□□□ 0.798e-15■■■■□ 25.4
SND1Q7KZF4 CYBA-209ENST00000568278 439 ntTSL 513.54□□□□□ -0.248e-15■■■■□ 25.4
SND1Q7KZF4 CLU-208ENST00000521770 520 ntTSL 28.33□□□□□ -1.083e-14■■■■□ 25.4
SND1Q7KZF4 RTN3-211ENST00000542238 735 ntTSL 315.98■□□□□ 0.153e-9■■■■□ 25.4
SND1Q7KZF4 LCLAT1-211ENST00000491680 1610 ntTSL 212.37□□□□□ -0.431e-6■■■■□ 25.4
SND1Q7KZF4 LCLAT1-209ENST00000478015 1862 ntTSL 210.47□□□□□ -0.731e-6■■■■□ 25.4
SND1Q7KZF4 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC9.18□□□□□ -0.941e-6■■■■□ 25.4
SND1Q7KZF4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.461e-6■■■■□ 25.4
SND1Q7KZF4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.34e-7■■■■□ 25.4
SND1Q7KZF4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.064e-7■■■■□ 25.4
SND1Q7KZF4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.364e-7■■■■□ 25.4
SND1Q7KZF4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.344e-7■■■■□ 25.4
SND1Q7KZF4 MFGE8-212ENST00000559997 531 ntTSL 518.19■□□□□ 0.51e-11■■■■□ 25.4
SND1Q7KZF4 CD81-203ENST00000464784 794 ntTSL 522.68■■□□□ 1.221e-13■■■■□ 25.4
SND1Q7KZF4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.2■□□□□ 0.661e-13■■■■□ 25.4
SND1Q7KZF4 CD81-213ENST00000527343 720 ntTSL 318.25■□□□□ 0.511e-13■■■■□ 25.4
SND1Q7KZF4 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.86■□□□□ 0.291e-13■■■■□ 25.4
SND1Q7KZF4 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.51□□□□□ -0.091e-13■■■■□ 25.4
SND1Q7KZF4 CYC1-202ENST00000525122 543 ntTSL 213.59□□□□□ -0.232e-12■■■■□ 25.4
SND1Q7KZF4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.65■■□□□ 1.381e-6■■■■□ 25.4
SND1Q7KZF4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.67■■□□□ 1.221e-6■■■■□ 25.4
SND1Q7KZF4 RCN2-204ENST00000557805 691 ntTSL 321.24■□□□□ 0.991e-6■■■■□ 25.4
SND1Q7KZF4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.291e-6■■■■□ 25.4
SND1Q7KZF4 C1GALT1C1-201ENST00000304661 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.528e-7■■■■□ 25.4
SND1Q7KZF4 COX6C-211ENST00000606245 646 nt11.78□□□□□ -0.521e-6■■■■□ 25.4
SND1Q7KZF4 UGCG-204ENST00000490110 581 ntTSL 310.06□□□□□ -0.81e-6■■■■□ 25.4
SND1Q7KZF4 MBNL1-208ENST00000460166 552 ntTSL 49.3□□□□□ -0.924e-7■■■■□ 25.4
SND1Q7KZF4 MBNL1-212ENST00000464596 989 ntTSL 58.97□□□□□ -0.974e-7■■■■□ 25.4
SND1Q7KZF4 C1GALT1C1-202ENST00000371313 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -18e-7■■■■□ 25.4
SND1Q7KZF4 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.6□□□□□ -1.194e-7■■■■□ 25.4
SND1Q7KZF4 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.6□□□□□ -1.194e-7■■■■□ 25.4
SND1Q7KZF4 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.46□□□□□ -1.224e-7■■■■□ 25.4
SND1Q7KZF4 MBNL1-216ENST00000478535 1451 ntTSL 1 (best)7.3□□□□□ -1.244e-7■■■■□ 25.4
SND1Q7KZF4 UGCG-205ENST00000495085 772 ntTSL 36.41□□□□□ -1.381e-6■■■■□ 25.4
SND1Q7KZF4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.91□□□□□ -1.464e-7■■■■□ 25.4
SND1Q7KZF4 PRCP-216ENST00000534264 574 ntTSL 45.4□□□□□ -1.542e-7■■■■□ 25.4
SND1Q7KZF4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.77□□□□□ -1.654e-7■■■■□ 25.4
SND1Q7KZF4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.684e-7■■■■□ 25.4
SND1Q7KZF4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.99□□□□□ -1.774e-7■■■■□ 25.4
SND1Q7KZF4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.83□□□□□ -1.84e-7■■■■□ 25.4
SND1Q7KZF4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.83□□□□□ -1.84e-7■■■■□ 25.4
SND1Q7KZF4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.217e-75■■■■□ 25.3
SND1Q7KZF4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.41□□□□□ -1.227e-75■■■■□ 25.3
SND1Q7KZF4 GNS-204ENST00000540196 907 ntTSL 56.63□□□□□ -1.355e-7■■■■□ 25.3
SND1Q7KZF4 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.071e-15■■■■□ 25.3
SND1Q7KZF4 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC14.33□□□□□ -0.121e-15■■■■□ 25.3
SND1Q7KZF4 CD74-205ENST00000517791 1015 ntTSL 313.57□□□□□ -0.246e-8■■■■□ 25.3
SND1Q7KZF4 CD74-211ENST00000523836 724 ntTSL 213.24□□□□□ -0.296e-8■■■■□ 25.3
SND1Q7KZF4 CD74-210ENST00000523813 546 ntTSL 49.74□□□□□ -0.856e-8■■■■□ 25.3
SND1Q7KZF4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.551e-6■■■■□ 25.3
SND1Q7KZF4 ALG3-206ENST00000446569 967 ntTSL 517.71■□□□□ 0.431e-6■■■■□ 25.3
SND1Q7KZF4 ALG3-202ENST00000411922 1452 ntTSL 1 (best)17.67■□□□□ 0.421e-6■■■■□ 25.3
SND1Q7KZF4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.73■□□□□ 0.111e-6■■■■□ 25.3
SND1Q7KZF4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.91□□□□□ -0.021e-6■■■■□ 25.3
SND1Q7KZF4 CANX-210ENST00000505090 485 ntTSL 210.07□□□□□ -0.86e-13■■■■□ 25.3
SND1Q7KZF4 TGFBR3-208ENST00000529608 785 ntTSL 58.79□□□□□ -17e-9■■■■□ 25.3
SND1Q7KZF4 C3-212ENST00000599899 1992 ntTSL 29.79□□□□□ -0.849e-51■■■■□ 25.3
Retrieved 100 of 13,567 protein–RNA pairs in 74.3 ms