RNA–Protein interactions for RNA: ENST00000486879.2

TTC13-206, Transcript of tetratricopeptide repeat domain 13, humanhuman

TSL 5

Gene TTC13, Length 492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13-206ENST00000486879 AEBP2Q6ZN18 517 aaPredicted RBP31.47■■■□□ 2.63
TTC13-206ENST00000486879 CHIC1Q5VXU3 224 aa29.76■■■□□ 2.35
TTC13-206ENST00000486879 SENP3Q9H4L4 574 aaPredicted RBP26.84■■□□□ 1.89
TTC13-206ENST00000486879 PHF23Q9BUL5 403 aaPredicted RBP26.47■■□□□ 1.83
TTC13-206ENST00000486879 FOXD1Q16676 465 aa25.04■■□□□ 1.6
TTC13-206ENST00000486879 PLPPR3Q6T4P5 718 aa23.7■■□□□ 1.38
TTC13-206ENST00000486879 MSH5O43196 834 aa23.48■■□□□ 1.35
TTC13-206ENST00000486879 PPP6R1Q9UPN7 881 aa23.32■■□□□ 1.32
TTC13-206ENST00000486879 PIAS4Q8N2W9 510 aaPredicted RBP23.28■■□□□ 1.32
TTC13-206ENST00000486879 POTEDQ86YR6 584 aa23.2■■□□□ 1.3
TTC13-206ENST00000486879 ADRA2BP18089 450 aa23.17■■□□□ 1.3
TTC13-206ENST00000486879 MAPK8IP2Q13387 824 aaPredicted RBP21.33■■□□□ 1.01
TTC13-206ENST00000486879 DMRT2Q9Y5R5 561 aa21.3■■□□□ 1
TTC13-206ENST00000486879 SCAF1Q9H7N4 1312 aaKnown RBP21.23■□□□□ 0.99
TTC13-206ENST00000486879 PPP4R3CPQ6ZMV5 832 aa20.73■□□□□ 0.91
TTC13-206ENST00000486879 HOXD11P31277 338 aaPredicted RBP20.5■□□□□ 0.87
TTC13-206ENST00000486879 CNKSR2Q8WXI2 1034 aa20.4■□□□□ 0.86
TTC13-206ENST00000486879 RNF216Q9NWF9 866 aaPredicted RBP20.28■□□□□ 0.84
TTC13-206ENST00000486879 DCAF8L1A6NGE4 600 aa20.2■□□□□ 0.82
TTC13-206ENST00000486879 CACNB1Q02641 598 aaPredicted RBP20.13■□□□□ 0.81
TTC13-206ENST00000486879 RNF39Q9H2S5 420 aa20.06■□□□□ 0.8
TTC13-206ENST00000486879 DNAJC5BQ9UF47 199 aa19.93■□□□□ 0.78
TTC13-206ENST00000486879 NCBP3Q53F19 620 aaKnown RBP19.88■□□□□ 0.77
TTC13-206ENST00000486879 C1QBPQ07021 282 aaKnown RBP19.75■□□□□ 0.75
TTC13-206ENST00000486879 NPM3O75607 178 aaKnown RBP19.63■□□□□ 0.73
TTC13-206ENST00000486879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.69
TTC13-206ENST00000486879 KCNA4P22459 653 aa19.1■□□□□ 0.65
TTC13-206ENST00000486879 U3KPZ7 1027 aaPredicted RBP19.04■□□□□ 0.64
TTC13-206ENST00000486879 SLC4A2P04920 1241 aa18.81■□□□□ 0.6
TTC13-206ENST00000486879 SPINK5Q9NQ38 1064 aaPredicted RBP18.76■□□□□ 0.59
TTC13-206ENST00000486879 DSG3P32926 999 aa18.72■□□□□ 0.59
TTC13-206ENST00000486879 CAPN15O75808 1086 aa18.67■□□□□ 0.58
TTC13-206ENST00000486879 APLP2Q06481 763 aa18.47■□□□□ 0.55
TTC13-206ENST00000486879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.44■□□□□ 0.54
TTC13-206ENST00000486879 HNRNPUL2Q1KMD3 747 aaKnown RBP18.44■□□□□ 0.54
TTC13-206ENST00000486879 ZNF219Q9P2Y4 722 aaPredicted RBP18.39■□□□□ 0.53
TTC13-206ENST00000486879 SAMD1Q6SPF0 538 aaPredicted RBP18.33■□□□□ 0.52
TTC13-206ENST00000486879 TRHP20396 242 aaPredicted RBP18.32■□□□□ 0.52
TTC13-206ENST00000486879 ABCB7O75027 752 aa18.2■□□□□ 0.5
TTC13-206ENST00000486879 MYCNP04198 464 aaPredicted RBP18.14■□□□□ 0.49
TTC13-206ENST00000486879 POTEHQ6S545 545 aa18.08■□□□□ 0.48
TTC13-206ENST00000486879 SLC4A1APQ9BWU0 796 aaKnown RBP17.97■□□□□ 0.47
TTC13-206ENST00000486879 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
TTC13-206ENST00000486879 POLA2Q14181 598 aa17.87■□□□□ 0.45
TTC13-206ENST00000486879 RBM42Q9BTD8 480 aaKnown RBP17.83■□□□□ 0.44
TTC13-206ENST00000486879 ATF5Q9Y2D1 282 aaPredicted RBP17.73■□□□□ 0.43
TTC13-206ENST00000486879 ZBTB22O15209 634 aa17.6■□□□□ 0.41
TTC13-206ENST00000486879 ZBTB12Q9Y330 459 aaPredicted RBP17.53■□□□□ 0.4
TTC13-206ENST00000486879 CHRDL2Q6WN34 429 aa17.48■□□□□ 0.39
TTC13-206ENST00000486879 ATXN8OSP0DMR3 200 aa17.43■□□□□ 0.38
TTC13-206ENST00000486879 AKT1S1Q96B36 256 aa17.42■□□□□ 0.38
TTC13-206ENST00000486879 OSCARQ8IYS5 282 aa17.29■□□□□ 0.36
TTC13-206ENST00000486879 REM2Q8IYK8 340 aaPredicted RBP17.23■□□□□ 0.35
TTC13-206ENST00000486879 PIP4P2Q8N4L2 257 aa17.04■□□□□ 0.32
TTC13-206ENST00000486879 PITPNM1O00562 1244 aa17.03■□□□□ 0.32
TTC13-206ENST00000486879 SPDYE2BA6NHP3 402 aa17■□□□□ 0.31
TTC13-206ENST00000486879 SPDYE6P0CI01 402 aa17■□□□□ 0.31
TTC13-206ENST00000486879 SPDYE2Q495Y8 402 aa17■□□□□ 0.31
TTC13-206ENST00000486879 FXR2P51116 673 aaKnown RBP eCLIP16.99■□□□□ 0.31
TTC13-206ENST00000486879 FBLN2P98095 1184 aa16.99■□□□□ 0.31
TTC13-206ENST00000486879 MKRN4PQ13434 485 aaPredicted RBP16.94■□□□□ 0.3
TTC13-206ENST00000486879 SP7Q8TDD2 431 aaPredicted RBP16.89■□□□□ 0.29
TTC13-206ENST00000486879 SSUH2Q9Y2M2 353 aa16.8■□□□□ 0.28
TTC13-206ENST00000486879 ZNF692Q9BU19 519 aaPredicted RBP16.71■□□□□ 0.27
TTC13-206ENST00000486879 SPDYE1Q8NFV5 336 aaPredicted RBP16.7■□□□□ 0.26
TTC13-206ENST00000486879 HAX1O00165 279 aa16.69■□□□□ 0.26
TTC13-206ENST00000486879 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
TTC13-206ENST00000486879 EVX2Q03828 476 aa16.57■□□□□ 0.24
TTC13-206ENST00000486879 CLEC11AQ9Y240 323 aa16.57■□□□□ 0.24
TTC13-206ENST00000486879 PRKAR2AP13861 404 aaKnown RBP16.56■□□□□ 0.24
TTC13-206ENST00000486879 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
TTC13-206ENST00000486879 C19orf67A6NJJ6 358 aa16.44■□□□□ 0.22
TTC13-206ENST00000486879 PRR29P0C7W0 189 aa16.35■□□□□ 0.21
TTC13-206ENST00000486879 CHADLQ6NUI6 762 aa16.31■□□□□ 0.2
TTC13-206ENST00000486879 EHMT2Q96KQ7 1210 aa16.21■□□□□ 0.19
TTC13-206ENST00000486879 GABBR2O75899 941 aa16.18■□□□□ 0.18
TTC13-206ENST00000486879 FARP1Q9Y4F1 1045 aaPredicted RBP16.13■□□□□ 0.17
TTC13-206ENST00000486879 STAG3Q9UJ98 1225 aa16.03■□□□□ 0.16
TTC13-206ENST00000486879 CD44P16070 742 aaKnown RBP16.02■□□□□ 0.16
TTC13-206ENST00000486879 SPDYE4A6NLX3 237 aa16.01■□□□□ 0.15
TTC13-206ENST00000486879 CLCN6P51797 869 aa15.98■□□□□ 0.15
TTC13-206ENST00000486879 CREBZFQ9NS37 354 aa15.98■□□□□ 0.15
TTC13-206ENST00000486879 POTEIP0CG38 1075 aa15.88■□□□□ 0.13
TTC13-206ENST00000486879 ZNF579Q8NAF0 562 aaKnown RBP15.85■□□□□ 0.13
TTC13-206ENST00000486879 LHX8Q68G74 356 aa15.83■□□□□ 0.12
TTC13-206ENST00000486879 PROM2Q8N271 834 aa15.77■□□□□ 0.12
TTC13-206ENST00000486879 ZRANB1Q9UGI0 708 aa15.76■□□□□ 0.11
TTC13-206ENST00000486879 MNX1P50219 401 aaPredicted RBP15.75■□□□□ 0.11
TTC13-206ENST00000486879 NPM1P06748 294 aaKnown RBP eCLIP15.63■□□□□ 0.09
TTC13-206ENST00000486879 DCBLD2Q96PD2 775 aa15.63■□□□□ 0.09
TTC13-206ENST00000486879 GALR2O43603 387 aaPredicted RBP15.61■□□□□ 0.09
TTC13-206ENST00000486879 PAK3O75914 559 aaPredicted RBP15.58■□□□□ 0.08
TTC13-206ENST00000486879 PHF12Q96QT6 1004 aa15.53■□□□□ 0.08
TTC13-206ENST00000486879 ASTLQ6HA08 431 aaPredicted RBP15.35■□□□□ 0.05
TTC13-206ENST00000486879 PELP1Q8IZL8 1130 aaKnown RBP15.35■□□□□ 0.05
TTC13-206ENST00000486879 MS4A3Q96HJ5 214 aa15.35■□□□□ 0.05
TTC13-206ENST00000486879 CCDC61Q9Y6R9 512 aa15.35■□□□□ 0.05
TTC13-206ENST00000486879 POTEB2H3BUK9 544 aa15.33■□□□□ 0.04
TTC13-206ENST00000486879 OTUD5Q96G74 571 aa15.3■□□□□ 0.04
TTC13-206ENST00000486879 ATMINO43313 823 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms