RNA–Protein interactions for RNA: ENST00000606245.1

COX6C-211, Transcript of cytochrome c oxidase subunit 6C, humanhuman

Gene COX6C, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6C-211ENST00000606245 AEBP2Q6ZN18 517 aaPredicted RBP22.13■■□□□ 1.13
COX6C-211ENST00000606245 CHIC1Q5VXU3 224 aa20.92■□□□□ 0.94
COX6C-211ENST00000606245 NISCHQ9Y2I1 1504 aa20.86■□□□□ 0.93
COX6C-211ENST00000606245 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
COX6C-211ENST00000606245 PHF23Q9BUL5 403 aaPredicted RBP18.68■□□□□ 0.58
COX6C-211ENST00000606245 CCDC180Q9P1Z9 1646 aa17.83■□□□□ 0.44
COX6C-211ENST00000606245 ZCCHC6Q5VYS8 1495 aaKnown RBP17.78■□□□□ 0.44
COX6C-211ENST00000606245 FOXD1Q16676 465 aa17.64■□□□□ 0.41
COX6C-211ENST00000606245 HRCP23327 699 aa17.61■□□□□ 0.41
COX6C-211ENST00000606245 DCAF1Q9Y4B6 1507 aa17.54■□□□□ 0.4
COX6C-211ENST00000606245 PELP1Q8IZL8 1130 aaKnown RBP17.3■□□□□ 0.36
COX6C-211ENST00000606245 SUPT5HO00267 1087 aaKnown RBP17.29■□□□□ 0.36
COX6C-211ENST00000606245 SHROOM4Q9ULL8 1493 aa17.29■□□□□ 0.36
COX6C-211ENST00000606245 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
COX6C-211ENST00000606245 MYO15BQ96JP2 1530 aa17.08■□□□□ 0.32
COX6C-211ENST00000606245 TRIM26Q12899 539 aaPredicted RBP17.01■□□□□ 0.31
COX6C-211ENST00000606245 PCGF6Q9BYE7 350 aa16.97■□□□□ 0.31
COX6C-211ENST00000606245 MYT1Q01538 1121 aa16.84■□□□□ 0.29
COX6C-211ENST00000606245 ABCC9O60706 1549 aa16.84■□□□□ 0.29
COX6C-211ENST00000606245 PLPPR3Q6T4P5 718 aa16.69■□□□□ 0.26
COX6C-211ENST00000606245 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
COX6C-211ENST00000606245 MSH5O43196 834 aa16.58■□□□□ 0.24
COX6C-211ENST00000606245 RSF1Q96T23 1441 aaPredicted RBP16.53■□□□□ 0.24
COX6C-211ENST00000606245 PPARGC1BQ86YN6 1023 aaKnown RBP16.51■□□□□ 0.23
COX6C-211ENST00000606245 PIAS4Q8N2W9 510 aaPredicted RBP16.51■□□□□ 0.23
COX6C-211ENST00000606245 LOC105371045A0A1W2PR82 267 aa16.44■□□□□ 0.22
COX6C-211ENST00000606245 DCAF8L2P0C7V8 631 aa16.43■□□□□ 0.22
COX6C-211ENST00000606245 TRIM41Q8WV44 630 aa16.42■□□□□ 0.22
COX6C-211ENST00000606245 PPP6R1Q9UPN7 881 aa16.4■□□□□ 0.22
COX6C-211ENST00000606245 ADRA2BP18089 450 aa16.39■□□□□ 0.21
COX6C-211ENST00000606245 NACADO15069 1562 aa16.36■□□□□ 0.21
COX6C-211ENST00000606245 POTEDQ86YR6 584 aa16.35■□□□□ 0.21
COX6C-211ENST00000606245 WRNQ14191 1432 aaPredicted RBP eCLIP16.3■□□□□ 0.2
COX6C-211ENST00000606245 CENPBP07199 599 aaPredicted RBP16.3■□□□□ 0.2
COX6C-211ENST00000606245 EEA1Q15075 1411 aa16.24■□□□□ 0.19
COX6C-211ENST00000606245 ACIN1Q9UKV3 1341 aaKnown RBP16.19■□□□□ 0.18
COX6C-211ENST00000606245 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
COX6C-211ENST00000606245 SCRIBQ14160 1630 aa16.16■□□□□ 0.18
COX6C-211ENST00000606245 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
COX6C-211ENST00000606245 CLSPNQ9HAW4 1339 aa16.14■□□□□ 0.17
COX6C-211ENST00000606245 EIF4G1Q04637 1599 aaKnown RBP16.09■□□□□ 0.17
COX6C-211ENST00000606245 TNIKQ9UKE5 1360 aa16.03■□□□□ 0.16
COX6C-211ENST00000606245 CCER1Q8TC90 406 aaPredicted RBP16■□□□□ 0.15
COX6C-211ENST00000606245 DIEXFQ68CQ4 756 aaKnown RBP15.98■□□□□ 0.15
COX6C-211ENST00000606245 MROH2BQ7Z745 1585 aa15.98■□□□□ 0.15
COX6C-211ENST00000606245 TOP2AP11388 1531 aaKnown RBP15.97■□□□□ 0.15
COX6C-211ENST00000606245 ZNF316A6NFI3 1004 aaPredicted RBP15.87■□□□□ 0.13
COX6C-211ENST00000606245 CEP162Q5TB80 1403 aa15.86■□□□□ 0.13
COX6C-211ENST00000606245 CECR2Q9BXF3 1484 aa15.86■□□□□ 0.13
COX6C-211ENST00000606245 NEUROD1Q13562 356 aa15.85■□□□□ 0.13
COX6C-211ENST00000606245 TTBK1Q5TCY1 1321 aaPredicted RBP15.85■□□□□ 0.13
COX6C-211ENST00000606245 WIZO95785 1651 aa15.85■□□□□ 0.13
COX6C-211ENST00000606245 GOLGA3Q08378 1498 aa15.84■□□□□ 0.13
COX6C-211ENST00000606245 GTF3C3Q9Y5Q9 886 aa15.8■□□□□ 0.12
COX6C-211ENST00000606245 BAZ1BQ9UIG0 1483 aaKnown RBP15.79■□□□□ 0.12
COX6C-211ENST00000606245 FAM9AQ8IZU1 332 aaPredicted RBP15.79■□□□□ 0.12
COX6C-211ENST00000606245 KIF21BO75037 1637 aa15.77■□□□□ 0.12
COX6C-211ENST00000606245 CEP164Q9UPV0 1460 aa15.76■□□□□ 0.11
COX6C-211ENST00000606245 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
COX6C-211ENST00000606245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.74■□□□□ 0.11
COX6C-211ENST00000606245 SMARCA2P51531 1590 aa15.74■□□□□ 0.11
COX6C-211ENST00000606245 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
COX6C-211ENST00000606245 PEG3Q9GZU2 1588 aa15.72■□□□□ 0.11
COX6C-211ENST00000606245 CCDC88BA6NC98 1476 aa15.7■□□□□ 0.1
COX6C-211ENST00000606245 VPS8Q8N3P4 1428 aa15.63■□□□□ 0.09
COX6C-211ENST00000606245 UNC13AQ9UPW8 1703 aa15.61■□□□□ 0.09
COX6C-211ENST00000606245 SOGA1O94964 1423 aa15.53■□□□□ 0.08
COX6C-211ENST00000606245 ABCC8Q09428 1581 aa15.53■□□□□ 0.08
COX6C-211ENST00000606245 ERICH3Q5RHP9 1530 aa15.53■□□□□ 0.08
COX6C-211ENST00000606245 CLIP1P30622 1438 aa15.52■□□□□ 0.08
COX6C-211ENST00000606245 APLP2Q06481 763 aa15.52■□□□□ 0.08
COX6C-211ENST00000606245 CUX2O14529 1486 aa15.51■□□□□ 0.07
COX6C-211ENST00000606245 UBTFP17480 764 aaKnown RBP15.5■□□□□ 0.07
COX6C-211ENST00000606245 TIMELESSQ9UNS1 1208 aa15.41■□□□□ 0.06
COX6C-211ENST00000606245 MAP3K1Q13233 1512 aa15.39■□□□□ 0.05
COX6C-211ENST00000606245 RRBP1Q9P2E9 1410 aaKnown RBP15.39■□□□□ 0.05
COX6C-211ENST00000606245 MIER1Q8N108 512 aa15.38■□□□□ 0.05
COX6C-211ENST00000606245 TOP2BQ02880 1626 aa15.36■□□□□ 0.05
COX6C-211ENST00000606245 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
COX6C-211ENST00000606245 BIVM-ERCC5R4GMW8 1640 aa15.33■□□□□ 0.04
COX6C-211ENST00000606245 DHX57Q6P158 1386 aaKnown RBP15.32■□□□□ 0.04
COX6C-211ENST00000606245 PRXQ9BXM0 1461 aa15.32■□□□□ 0.04
COX6C-211ENST00000606245 SYNJ1O43426 1573 aa15.31■□□□□ 0.04
COX6C-211ENST00000606245 RUSC2Q8N2Y8 1516 aa15.29■□□□□ 0.04
COX6C-211ENST00000606245 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
COX6C-211ENST00000606245 EHMT2Q96KQ7 1210 aa15.26■□□□□ 0.03
COX6C-211ENST00000606245 ATAD2BQ9ULI0 1458 aa15.25■□□□□ 0.03
COX6C-211ENST00000606245 SUPT16HQ9Y5B9 1047 aaKnown RBP15.24■□□□□ 0.03
COX6C-211ENST00000606245 RAPGEF2Q9Y4G8 1499 aa15.23■□□□□ 0.03
COX6C-211ENST00000606245 ANP32EQ9BTT0 268 aa15.2■□□□□ 0.02
COX6C-211ENST00000606245 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.2■□□□□ 0.02
COX6C-211ENST00000606245 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
COX6C-211ENST00000606245 MYT1LQ9UL68 1186 aa15.19■□□□□ 0.02
COX6C-211ENST00000606245 YTHDC1Q96MU7 727 aaKnown RBP15.18■□□□□ 0.02
COX6C-211ENST00000606245 CCNB3Q8WWL7 1395 aa15.18■□□□□ 0.02
COX6C-211ENST00000606245 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
COX6C-211ENST00000606245 ARAP1Q96P48 1450 aa15.16■□□□□ 0.02
COX6C-211ENST00000606245 CCER2I3L3R5 266 aa15.16■□□□□ 0.02
COX6C-211ENST00000606245 HMGXB3Q12766 1538 aa15.16■□□□□ 0.02
COX6C-211ENST00000606245 ERICH6BQ5W0A0 696 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms