Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RTL4Q6ZR62 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTL4Q6ZR62 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.74■■□□□ 1.07
RTL4Q6ZR62 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTL4Q6ZR62 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.74■■□□□ 1.07
RTL4Q6ZR62 KRT18P24-201ENST00000344739 1156 ntBASIC21.74■■□□□ 1.07
RTL4Q6ZR62 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTL4Q6ZR62 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RTL4Q6ZR62 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTL4Q6ZR62 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTL4Q6ZR62 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTL4Q6ZR62 AC097639.1-201ENST00000565519 1891 ntBASIC21.73■■□□□ 1.07
RTL4Q6ZR62 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTL4Q6ZR62 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTL4Q6ZR62 THA1P-201ENST00000590384 1145 ntBASIC21.73■■□□□ 1.07
RTL4Q6ZR62 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.73■■□□□ 1.07
RTL4Q6ZR62 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTL4Q6ZR62 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTL4Q6ZR62 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTL4Q6ZR62 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTL4Q6ZR62 AC022211.4-201ENST00000625094 2161 ntBASIC21.72■■□□□ 1.07
RTL4Q6ZR62 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTL4Q6ZR62 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.72■■□□□ 1.07
RTL4Q6ZR62 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTL4Q6ZR62 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.72■■□□□ 1.07
RTL4Q6ZR62 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTL4Q6ZR62 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTL4Q6ZR62 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTL4Q6ZR62 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTL4Q6ZR62 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.71■■□□□ 1.07
RTL4Q6ZR62 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RTL4Q6ZR62 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.71■■□□□ 1.07
RTL4Q6ZR62 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTL4Q6ZR62 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.71■■□□□ 1.07
RTL4Q6ZR62 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RTL4Q6ZR62 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTL4Q6ZR62 AC120024.1-201ENST00000562672 995 ntBASIC21.7■■□□□ 1.06
RTL4Q6ZR62 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.7■■□□□ 1.06
RTL4Q6ZR62 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTL4Q6ZR62 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.7■■□□□ 1.06
RTL4Q6ZR62 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.7■■□□□ 1.06
RTL4Q6ZR62 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RTL4Q6ZR62 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTL4Q6ZR62 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.69■■□□□ 1.06
RTL4Q6ZR62 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.69■■□□□ 1.06
RTL4Q6ZR62 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.69■■□□□ 1.06
RTL4Q6ZR62 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.69■■□□□ 1.06
RTL4Q6ZR62 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RTL4Q6ZR62 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTL4Q6ZR62 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.69■■□□□ 1.06
RTL4Q6ZR62 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTL4Q6ZR62 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTL4Q6ZR62 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTL4Q6ZR62 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTL4Q6ZR62 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTL4Q6ZR62 AC093323.1-202ENST00000635031 2045 ntBASIC21.68■■□□□ 1.06
RTL4Q6ZR62 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTL4Q6ZR62 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTL4Q6ZR62 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTL4Q6ZR62 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTL4Q6ZR62 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTL4Q6ZR62 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RTL4Q6ZR62 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTL4Q6ZR62 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL4Q6ZR62 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL4Q6ZR62 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.67■■□□□ 1.06
RTL4Q6ZR62 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.67■■□□□ 1.06
RTL4Q6ZR62 FOXO3B-201ENST00000395675 1928 ntBASIC21.67■■□□□ 1.06
RTL4Q6ZR62 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RTL4Q6ZR62 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL4Q6ZR62 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTL4Q6ZR62 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTL4Q6ZR62 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTL4Q6ZR62 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTL4Q6ZR62 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.66■■□□□ 1.06
RTL4Q6ZR62 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RTL4Q6ZR62 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTL4Q6ZR62 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
RTL4Q6ZR62 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTL4Q6ZR62 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.66■■□□□ 1.06
RTL4Q6ZR62 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTL4Q6ZR62 AC011551.1-201ENST00000614101 683 ntBASIC21.66■■□□□ 1.06
RTL4Q6ZR62 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTL4Q6ZR62 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTL4Q6ZR62 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTL4Q6ZR62 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTL4Q6ZR62 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTL4Q6ZR62 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RTL4Q6ZR62 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
RTL4Q6ZR62 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTL4Q6ZR62 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RTL4Q6ZR62 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTL4Q6ZR62 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTL4Q6ZR62 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTL4Q6ZR62 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RTL4Q6ZR62 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.64■■□□□ 1.05
RTL4Q6ZR62 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.64■■□□□ 1.05
RTL4Q6ZR62 Z92544.1-202ENST00000571933 1220 ntBASIC21.64■■□□□ 1.05
RTL4Q6ZR62 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
RTL4Q6ZR62 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms