Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.53■■□□□ 1.36
RAB11FIP1Q6WKZ4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RAB11FIP1Q6WKZ4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.53■■□□□ 1.36
RAB11FIP1Q6WKZ4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RAB11FIP1Q6WKZ4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RAB11FIP1Q6WKZ4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.52■■□□□ 1.36
RAB11FIP1Q6WKZ4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RAB11FIP1Q6WKZ4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RAB11FIP1Q6WKZ4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RAB11FIP1Q6WKZ4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
RAB11FIP1Q6WKZ4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.51■■□□□ 1.35
RAB11FIP1Q6WKZ4 MTDHP2-201ENST00000601468 714 ntBASIC23.51■■□□□ 1.35
RAB11FIP1Q6WKZ4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.51■■□□□ 1.35
RAB11FIP1Q6WKZ4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
RAB11FIP1Q6WKZ4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
RAB11FIP1Q6WKZ4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.5■■□□□ 1.35
RAB11FIP1Q6WKZ4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
RAB11FIP1Q6WKZ4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.5■■□□□ 1.35
RAB11FIP1Q6WKZ4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.5■■□□□ 1.35
RAB11FIP1Q6WKZ4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAB11FIP1Q6WKZ4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.49■■□□□ 1.35
RAB11FIP1Q6WKZ4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.49■■□□□ 1.35
RAB11FIP1Q6WKZ4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAB11FIP1Q6WKZ4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAB11FIP1Q6WKZ4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RAB11FIP1Q6WKZ4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RAB11FIP1Q6WKZ4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.48■■□□□ 1.35
RAB11FIP1Q6WKZ4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAB11FIP1Q6WKZ4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAB11FIP1Q6WKZ4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.48■■□□□ 1.35
RAB11FIP1Q6WKZ4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAB11FIP1Q6WKZ4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.47■■□□□ 1.35
RAB11FIP1Q6WKZ4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.47■■□□□ 1.35
RAB11FIP1Q6WKZ4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAB11FIP1Q6WKZ4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAB11FIP1Q6WKZ4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.47■■□□□ 1.35
RAB11FIP1Q6WKZ4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAB11FIP1Q6WKZ4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RAB11FIP1Q6WKZ4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RAB11FIP1Q6WKZ4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.46■■□□□ 1.35
RAB11FIP1Q6WKZ4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RAB11FIP1Q6WKZ4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
RAB11FIP1Q6WKZ4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.45■■□□□ 1.34
RAB11FIP1Q6WKZ4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAB11FIP1Q6WKZ4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.45■■□□□ 1.34
RAB11FIP1Q6WKZ4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.44■■□□□ 1.34
RAB11FIP1Q6WKZ4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
RAB11FIP1Q6WKZ4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.44■■□□□ 1.34
RAB11FIP1Q6WKZ4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.44■■□□□ 1.34
RAB11FIP1Q6WKZ4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAB11FIP1Q6WKZ4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAB11FIP1Q6WKZ4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.44■■□□□ 1.34
RAB11FIP1Q6WKZ4 MIR6724-1-201ENST00000616420 92 ntBASIC23.44■■□□□ 1.34
RAB11FIP1Q6WKZ4 MIR6724-2-201ENST00000616483 92 ntBASIC23.44■■□□□ 1.34
RAB11FIP1Q6WKZ4 MIR6724-4-201ENST00000617390 92 ntBASIC23.44■■□□□ 1.34
RAB11FIP1Q6WKZ4 MIR6724-3-201ENST00000622482 92 ntBASIC23.44■■□□□ 1.34
RAB11FIP1Q6WKZ4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.43■■□□□ 1.34
RAB11FIP1Q6WKZ4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAB11FIP1Q6WKZ4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
RAB11FIP1Q6WKZ4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAB11FIP1Q6WKZ4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
RAB11FIP1Q6WKZ4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.43■■□□□ 1.34
RAB11FIP1Q6WKZ4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.43■■□□□ 1.34
RAB11FIP1Q6WKZ4 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.43■■□□□ 1.34
RAB11FIP1Q6WKZ4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.43■■□□□ 1.34
RAB11FIP1Q6WKZ4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.43■■□□□ 1.34
RAB11FIP1Q6WKZ4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.43■■□□□ 1.34
RAB11FIP1Q6WKZ4 DUSP8P4-201ENST00000399538 1761 ntBASIC23.42■■□□□ 1.34
RAB11FIP1Q6WKZ4 AC091060.1-201ENST00000623524 1766 ntBASIC23.42■■□□□ 1.34
RAB11FIP1Q6WKZ4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
RAB11FIP1Q6WKZ4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
RAB11FIP1Q6WKZ4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RAB11FIP1Q6WKZ4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.42■■□□□ 1.34
RAB11FIP1Q6WKZ4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.42■■□□□ 1.34
RAB11FIP1Q6WKZ4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.42■■□□□ 1.34
RAB11FIP1Q6WKZ4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RAB11FIP1Q6WKZ4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RAB11FIP1Q6WKZ4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.41■■□□□ 1.34
RAB11FIP1Q6WKZ4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.41■■□□□ 1.34
RAB11FIP1Q6WKZ4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RAB11FIP1Q6WKZ4 AL117332.1-201ENST00000622628 974 ntBASIC23.4■■□□□ 1.34
RAB11FIP1Q6WKZ4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RAB11FIP1Q6WKZ4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.4■■□□□ 1.34
RAB11FIP1Q6WKZ4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
RAB11FIP1Q6WKZ4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAB11FIP1Q6WKZ4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
RAB11FIP1Q6WKZ4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
RAB11FIP1Q6WKZ4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RAB11FIP1Q6WKZ4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.39■■□□□ 1.33
RAB11FIP1Q6WKZ4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.39■■□□□ 1.33
RAB11FIP1Q6WKZ4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.39■■□□□ 1.33
RAB11FIP1Q6WKZ4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.39■■□□□ 1.33
RAB11FIP1Q6WKZ4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.39■■□□□ 1.33
RAB11FIP1Q6WKZ4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
RAB11FIP1Q6WKZ4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RAB11FIP1Q6WKZ4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.38■■□□□ 1.33
RAB11FIP1Q6WKZ4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAB11FIP1Q6WKZ4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.38■■□□□ 1.33
RAB11FIP1Q6WKZ4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAB11FIP1Q6WKZ4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms