Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
DENND1BQ6P3S1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.79■■□□□ 1.56
DENND1BQ6P3S1 AC090877.2-201ENST00000558441 1738 ntBASIC24.78■■□□□ 1.56
DENND1BQ6P3S1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
DENND1BQ6P3S1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
DENND1BQ6P3S1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
DENND1BQ6P3S1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
DENND1BQ6P3S1 AC135731.1-201ENST00000569415 2548 ntBASIC24.78■■□□□ 1.56
DENND1BQ6P3S1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
DENND1BQ6P3S1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.78■■□□□ 1.56
DENND1BQ6P3S1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
DENND1BQ6P3S1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
DENND1BQ6P3S1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.77■■□□□ 1.56
DENND1BQ6P3S1 AC022616.5-201ENST00000518796 181 ntBASIC24.77■■□□□ 1.56
DENND1BQ6P3S1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
DENND1BQ6P3S1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DENND1BQ6P3S1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.76■■□□□ 1.55
DENND1BQ6P3S1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
DENND1BQ6P3S1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
DENND1BQ6P3S1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.76■■□□□ 1.55
DENND1BQ6P3S1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.76■■□□□ 1.55
DENND1BQ6P3S1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.75■■□□□ 1.55
DENND1BQ6P3S1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
DENND1BQ6P3S1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
DENND1BQ6P3S1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.75■■□□□ 1.55
DENND1BQ6P3S1 MIR4508-201ENST00000584178 70 ntBASIC24.75■■□□□ 1.55
DENND1BQ6P3S1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.75■■□□□ 1.55
DENND1BQ6P3S1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
DENND1BQ6P3S1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
DENND1BQ6P3S1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
DENND1BQ6P3S1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.74■■□□□ 1.55
DENND1BQ6P3S1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
DENND1BQ6P3S1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
DENND1BQ6P3S1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.74■■□□□ 1.55
DENND1BQ6P3S1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.74■■□□□ 1.55
DENND1BQ6P3S1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
DENND1BQ6P3S1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
DENND1BQ6P3S1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
DENND1BQ6P3S1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
DENND1BQ6P3S1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
DENND1BQ6P3S1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
DENND1BQ6P3S1 AC120024.1-201ENST00000562672 995 ntBASIC24.73■■□□□ 1.55
DENND1BQ6P3S1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
DENND1BQ6P3S1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
DENND1BQ6P3S1 HLA-L-211ENST00000482052 1765 ntBASIC24.72■■□□□ 1.55
DENND1BQ6P3S1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DENND1BQ6P3S1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.72■■□□□ 1.55
DENND1BQ6P3S1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
DENND1BQ6P3S1 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.72■■□□□ 1.55
DENND1BQ6P3S1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
DENND1BQ6P3S1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.71■■□□□ 1.55
DENND1BQ6P3S1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
DENND1BQ6P3S1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.71■■□□□ 1.55
DENND1BQ6P3S1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DENND1BQ6P3S1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.71■■□□□ 1.55
DENND1BQ6P3S1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
DENND1BQ6P3S1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
DENND1BQ6P3S1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
DENND1BQ6P3S1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DENND1BQ6P3S1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.7■■□□□ 1.55
DENND1BQ6P3S1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DENND1BQ6P3S1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.7■■□□□ 1.54
DENND1BQ6P3S1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
DENND1BQ6P3S1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.7■■□□□ 1.54
DENND1BQ6P3S1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DENND1BQ6P3S1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DENND1BQ6P3S1 AC011551.1-201ENST00000614101 683 ntBASIC24.69■■□□□ 1.54
DENND1BQ6P3S1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DENND1BQ6P3S1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.69■■□□□ 1.54
DENND1BQ6P3S1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DENND1BQ6P3S1 LINC01124-201ENST00000409786 2117 ntBASIC24.68■■□□□ 1.54
DENND1BQ6P3S1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
DENND1BQ6P3S1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
DENND1BQ6P3S1 YBX1P4-201ENST00000392794 808 ntBASIC24.68■■□□□ 1.54
DENND1BQ6P3S1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DENND1BQ6P3S1 AC103724.3-201ENST00000564481 992 ntBASIC24.68■■□□□ 1.54
DENND1BQ6P3S1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
DENND1BQ6P3S1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
DENND1BQ6P3S1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
DENND1BQ6P3S1 KRT18P24-201ENST00000344739 1156 ntBASIC24.67■■□□□ 1.54
DENND1BQ6P3S1 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.67■■□□□ 1.54
DENND1BQ6P3S1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.67■■□□□ 1.54
DENND1BQ6P3S1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.67■■□□□ 1.54
DENND1BQ6P3S1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.67■■□□□ 1.54
DENND1BQ6P3S1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
DENND1BQ6P3S1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DENND1BQ6P3S1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DENND1BQ6P3S1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
DENND1BQ6P3S1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
DENND1BQ6P3S1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.65■■□□□ 1.54
DENND1BQ6P3S1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.65■■□□□ 1.54
DENND1BQ6P3S1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
DENND1BQ6P3S1 THA1P-201ENST00000590384 1145 ntBASIC24.65■■□□□ 1.54
DENND1BQ6P3S1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.65■■□□□ 1.54
DENND1BQ6P3S1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
DENND1BQ6P3S1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.65■■□□□ 1.54
DENND1BQ6P3S1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.64■■□□□ 1.54
DENND1BQ6P3S1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
DENND1BQ6P3S1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
DENND1BQ6P3S1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms