Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNRNP48Q6IEG0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SNRNP48Q6IEG0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SNRNP48Q6IEG0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SNRNP48Q6IEG0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNRNP48Q6IEG0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SNRNP48Q6IEG0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SNRNP48Q6IEG0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.91■■□□□ 1.9
SNRNP48Q6IEG0 SNX5-217ENST00000606557 1087 ntBASIC26.91■■□□□ 1.9
SNRNP48Q6IEG0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
SNRNP48Q6IEG0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.91■■□□□ 1.9
SNRNP48Q6IEG0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNRNP48Q6IEG0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
SNRNP48Q6IEG0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.9■■□□□ 1.9
SNRNP48Q6IEG0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.9■■□□□ 1.9
SNRNP48Q6IEG0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SNRNP48Q6IEG0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
SNRNP48Q6IEG0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.9■■□□□ 1.9
SNRNP48Q6IEG0 MIR4466-201ENST00000606121 54 ntBASIC26.9■■□□□ 1.9
SNRNP48Q6IEG0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SNRNP48Q6IEG0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
SNRNP48Q6IEG0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SNRNP48Q6IEG0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.89■■□□□ 1.9
SNRNP48Q6IEG0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SNRNP48Q6IEG0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
SNRNP48Q6IEG0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.88■■□□□ 1.89
SNRNP48Q6IEG0 MIR638-201ENST00000385237 100 ntBASIC26.88■■□□□ 1.89
SNRNP48Q6IEG0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SNRNP48Q6IEG0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.88■■□□□ 1.89
SNRNP48Q6IEG0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.88■■□□□ 1.89
SNRNP48Q6IEG0 AL139246.5-201ENST00000606645 996 ntBASIC26.88■■□□□ 1.89
SNRNP48Q6IEG0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
SNRNP48Q6IEG0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SNRNP48Q6IEG0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.87■■□□□ 1.89
SNRNP48Q6IEG0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.87■■□□□ 1.89
SNRNP48Q6IEG0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.87■■□□□ 1.89
SNRNP48Q6IEG0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SNRNP48Q6IEG0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.87■■□□□ 1.89
SNRNP48Q6IEG0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SNRNP48Q6IEG0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SNRNP48Q6IEG0 AL512631.2-201ENST00000604634 923 ntBASIC26.86■■□□□ 1.89
SNRNP48Q6IEG0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
SNRNP48Q6IEG0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.85■■□□□ 1.89
SNRNP48Q6IEG0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.85■■□□□ 1.89
SNRNP48Q6IEG0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.85■■□□□ 1.89
SNRNP48Q6IEG0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SNRNP48Q6IEG0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SNRNP48Q6IEG0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SNRNP48Q6IEG0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNRNP48Q6IEG0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.84■■□□□ 1.89
SNRNP48Q6IEG0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNRNP48Q6IEG0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.84■■□□□ 1.89
SNRNP48Q6IEG0 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.84■■□□□ 1.89
SNRNP48Q6IEG0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNRNP48Q6IEG0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SNRNP48Q6IEG0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNRNP48Q6IEG0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.83■■□□□ 1.89
SNRNP48Q6IEG0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNRNP48Q6IEG0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.83■■□□□ 1.89
SNRNP48Q6IEG0 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.83■■□□□ 1.89
SNRNP48Q6IEG0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.83■■□□□ 1.89
SNRNP48Q6IEG0 MIR6722-201ENST00000617286 78 ntBASIC26.83■■□□□ 1.89
SNRNP48Q6IEG0 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.83■■□□□ 1.89
SNRNP48Q6IEG0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNRNP48Q6IEG0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNRNP48Q6IEG0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
SNRNP48Q6IEG0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.82■■□□□ 1.88
SNRNP48Q6IEG0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNRNP48Q6IEG0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNRNP48Q6IEG0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.81■■□□□ 1.88
SNRNP48Q6IEG0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.81■■□□□ 1.88
SNRNP48Q6IEG0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNRNP48Q6IEG0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNRNP48Q6IEG0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNRNP48Q6IEG0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SNRNP48Q6IEG0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.8■■□□□ 1.88
SNRNP48Q6IEG0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SNRNP48Q6IEG0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNRNP48Q6IEG0 AC110285.6-201ENST00000617652 491 ntBASIC26.8■■□□□ 1.88
SNRNP48Q6IEG0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
SNRNP48Q6IEG0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNRNP48Q6IEG0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SNRNP48Q6IEG0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.79■■□□□ 1.88
SNRNP48Q6IEG0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.79■■□□□ 1.88
SNRNP48Q6IEG0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
SNRNP48Q6IEG0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.78■■□□□ 1.88
SNRNP48Q6IEG0 AC096631.2-201ENST00000436136 790 ntBASIC26.78■■□□□ 1.88
SNRNP48Q6IEG0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.78■■□□□ 1.88
SNRNP48Q6IEG0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNRNP48Q6IEG0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
SNRNP48Q6IEG0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.78■■□□□ 1.88
SNRNP48Q6IEG0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
SNRNP48Q6IEG0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SNRNP48Q6IEG0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.77■■□□□ 1.88
SNRNP48Q6IEG0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SNRNP48Q6IEG0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SNRNP48Q6IEG0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.77■■□□□ 1.88
SNRNP48Q6IEG0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
SNRNP48Q6IEG0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.76■■□□□ 1.88
SNRNP48Q6IEG0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms