Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 AP003733.4-201ENST00000623785 1697 ntBASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATPAF1Q5TC12 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.11■□□□□ 0.81
ATPAF1Q5TC12 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.11■□□□□ 0.81
ATPAF1Q5TC12 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATPAF1Q5TC12 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ATPAF1Q5TC12 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ATPAF1Q5TC12 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ATPAF1Q5TC12 AC079834.2-201ENST00000609776 1949 ntBASIC20.1■□□□□ 0.81
ATPAF1Q5TC12 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.1■□□□□ 0.81
ATPAF1Q5TC12 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATPAF1Q5TC12 KRT18P10-201ENST00000388836 1287 ntBASIC20.1■□□□□ 0.81
ATPAF1Q5TC12 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATPAF1Q5TC12 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.1■□□□□ 0.81
ATPAF1Q5TC12 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ATPAF1Q5TC12 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATPAF1Q5TC12 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATPAF1Q5TC12 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATPAF1Q5TC12 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ATPAF1Q5TC12 KRT18P60-201ENST00000312876 1297 ntBASIC20.09■□□□□ 0.81
ATPAF1Q5TC12 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ATPAF1Q5TC12 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ATPAF1Q5TC12 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ATPAF1Q5TC12 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.09■□□□□ 0.81
ATPAF1Q5TC12 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATPAF1Q5TC12 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
ATPAF1Q5TC12 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
ATPAF1Q5TC12 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.08■□□□□ 0.81
ATPAF1Q5TC12 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATPAF1Q5TC12 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
ATPAF1Q5TC12 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ATPAF1Q5TC12 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
ATPAF1Q5TC12 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATPAF1Q5TC12 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.07■□□□□ 0.8
ATPAF1Q5TC12 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ATPAF1Q5TC12 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.07■□□□□ 0.8
ATPAF1Q5TC12 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ATPAF1Q5TC12 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.07■□□□□ 0.8
ATPAF1Q5TC12 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATPAF1Q5TC12 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.06■□□□□ 0.8
ATPAF1Q5TC12 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.06■□□□□ 0.8
ATPAF1Q5TC12 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ATPAF1Q5TC12 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATPAF1Q5TC12 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATPAF1Q5TC12 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATPAF1Q5TC12 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATPAF1Q5TC12 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATPAF1Q5TC12 LINC00543-201ENST00000567234 1845 ntBASIC20.06■□□□□ 0.8
ATPAF1Q5TC12 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATPAF1Q5TC12 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATPAF1Q5TC12 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.05■□□□□ 0.8
ATPAF1Q5TC12 AC129492.7-201ENST00000622992 756 ntBASIC20.05■□□□□ 0.8
ATPAF1Q5TC12 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATPAF1Q5TC12 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.05■□□□□ 0.8
ATPAF1Q5TC12 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATPAF1Q5TC12 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATPAF1Q5TC12 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.05■□□□□ 0.8
ATPAF1Q5TC12 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATPAF1Q5TC12 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATPAF1Q5TC12 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ATPAF1Q5TC12 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.04■□□□□ 0.8
ATPAF1Q5TC12 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATPAF1Q5TC12 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATPAF1Q5TC12 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 AC018755.3-202ENST00000596210 929 ntBASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATPAF1Q5TC12 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATPAF1Q5TC12 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ATPAF1Q5TC12 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATPAF1Q5TC12 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATPAF1Q5TC12 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATPAF1Q5TC12 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATPAF1Q5TC12 SPCS2P3-201ENST00000500401 656 ntBASIC20.02■□□□□ 0.8
ATPAF1Q5TC12 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATPAF1Q5TC12 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ATPAF1Q5TC12 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATPAF1Q5TC12 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATPAF1Q5TC12 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATPAF1Q5TC12 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms