Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PTPN20Q4JDL3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PTPN20Q4JDL3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PTPN20Q4JDL3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PTPN20Q4JDL3 AC090877.2-201ENST00000558441 1738 ntBASIC24.67■■□□□ 1.54
PTPN20Q4JDL3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PTPN20Q4JDL3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.67■■□□□ 1.54
PTPN20Q4JDL3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.67■■□□□ 1.54
PTPN20Q4JDL3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PTPN20Q4JDL3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PTPN20Q4JDL3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PTPN20Q4JDL3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PTPN20Q4JDL3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.66■■□□□ 1.54
PTPN20Q4JDL3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PTPN20Q4JDL3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PTPN20Q4JDL3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
PTPN20Q4JDL3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.66■■□□□ 1.54
PTPN20Q4JDL3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PTPN20Q4JDL3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PTPN20Q4JDL3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PTPN20Q4JDL3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PTPN20Q4JDL3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.65■■□□□ 1.54
PTPN20Q4JDL3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PTPN20Q4JDL3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.65■■□□□ 1.54
PTPN20Q4JDL3 HLA-L-211ENST00000482052 1765 ntBASIC24.65■■□□□ 1.54
PTPN20Q4JDL3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PTPN20Q4JDL3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PTPN20Q4JDL3 AC022616.5-201ENST00000518796 181 ntBASIC24.64■■□□□ 1.54
PTPN20Q4JDL3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.64■■□□□ 1.54
PTPN20Q4JDL3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
PTPN20Q4JDL3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.64■■□□□ 1.53
PTPN20Q4JDL3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PTPN20Q4JDL3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.64■■□□□ 1.53
PTPN20Q4JDL3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
PTPN20Q4JDL3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PTPN20Q4JDL3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PTPN20Q4JDL3 LINC01124-201ENST00000409786 2117 ntBASIC24.63■■□□□ 1.53
PTPN20Q4JDL3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PTPN20Q4JDL3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PTPN20Q4JDL3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
PTPN20Q4JDL3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
PTPN20Q4JDL3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
PTPN20Q4JDL3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PTPN20Q4JDL3 AC103834.1-201ENST00000520383 144 ntBASIC24.62■■□□□ 1.53
PTPN20Q4JDL3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PTPN20Q4JDL3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PTPN20Q4JDL3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PTPN20Q4JDL3 AC093323.1-202ENST00000635031 2045 ntBASIC24.61■■□□□ 1.53
PTPN20Q4JDL3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
PTPN20Q4JDL3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PTPN20Q4JDL3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.61■■□□□ 1.53
PTPN20Q4JDL3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PTPN20Q4JDL3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PTPN20Q4JDL3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PTPN20Q4JDL3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PTPN20Q4JDL3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PTPN20Q4JDL3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PTPN20Q4JDL3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.6■■□□□ 1.53
PTPN20Q4JDL3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
PTPN20Q4JDL3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PTPN20Q4JDL3 MIR4508-201ENST00000584178 70 ntBASIC24.6■■□□□ 1.53
PTPN20Q4JDL3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PTPN20Q4JDL3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.6■■□□□ 1.53
PTPN20Q4JDL3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.6■■□□□ 1.53
PTPN20Q4JDL3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTPN20Q4JDL3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.59■■□□□ 1.53
PTPN20Q4JDL3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.59■■□□□ 1.53
PTPN20Q4JDL3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PTPN20Q4JDL3 AC011551.1-201ENST00000614101 683 ntBASIC24.59■■□□□ 1.53
PTPN20Q4JDL3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.59■■□□□ 1.53
PTPN20Q4JDL3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTPN20Q4JDL3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.59■■□□□ 1.53
PTPN20Q4JDL3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PTPN20Q4JDL3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.59■■□□□ 1.53
PTPN20Q4JDL3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.59■■□□□ 1.53
PTPN20Q4JDL3 KRT8P33-201ENST00000508125 1423 ntBASIC24.59■■□□□ 1.53
PTPN20Q4JDL3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
PTPN20Q4JDL3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.59■■□□□ 1.53
PTPN20Q4JDL3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.58■■□□□ 1.53
PTPN20Q4JDL3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
PTPN20Q4JDL3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PTPN20Q4JDL3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.58■■□□□ 1.53
PTPN20Q4JDL3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.58■■□□□ 1.53
PTPN20Q4JDL3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PTPN20Q4JDL3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PTPN20Q4JDL3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PTPN20Q4JDL3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTPN20Q4JDL3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
PTPN20Q4JDL3 AC120024.1-201ENST00000562672 995 ntBASIC24.57■■□□□ 1.52
PTPN20Q4JDL3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.57■■□□□ 1.52
PTPN20Q4JDL3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTPN20Q4JDL3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PTPN20Q4JDL3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTPN20Q4JDL3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PTPN20Q4JDL3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PTPN20Q4JDL3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.56■■□□□ 1.52
PTPN20Q4JDL3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.56■■□□□ 1.52
PTPN20Q4JDL3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PTPN20Q4JDL3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
PTPN20Q4JDL3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms