Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.3■□□□□ 0.84
TBC1D28Q2M2D7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TBC1D28Q2M2D7 AP003733.4-201ENST00000623785 1697 ntBASIC20.29■□□□□ 0.84
TBC1D28Q2M2D7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TBC1D28Q2M2D7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TBC1D28Q2M2D7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TBC1D28Q2M2D7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TBC1D28Q2M2D7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TBC1D28Q2M2D7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TBC1D28Q2M2D7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TBC1D28Q2M2D7 AC103724.3-201ENST00000564481 992 ntBASIC20.29■□□□□ 0.84
TBC1D28Q2M2D7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.29■□□□□ 0.84
TBC1D28Q2M2D7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TBC1D28Q2M2D7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TBC1D28Q2M2D7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.29■□□□□ 0.84
TBC1D28Q2M2D7 AL031848.2-201ENST00000607670 837 ntBASIC20.28■□□□□ 0.84
TBC1D28Q2M2D7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.28■□□□□ 0.84
TBC1D28Q2M2D7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TBC1D28Q2M2D7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
TBC1D28Q2M2D7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TBC1D28Q2M2D7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TBC1D28Q2M2D7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.27■□□□□ 0.84
TBC1D28Q2M2D7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D28Q2M2D7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D28Q2M2D7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D28Q2M2D7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D28Q2M2D7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D28Q2M2D7 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.27■□□□□ 0.84
TBC1D28Q2M2D7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.27■□□□□ 0.84
TBC1D28Q2M2D7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.27■□□□□ 0.83
TBC1D28Q2M2D7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D28Q2M2D7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.26■□□□□ 0.83
TBC1D28Q2M2D7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D28Q2M2D7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.26■□□□□ 0.83
TBC1D28Q2M2D7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.26■□□□□ 0.83
TBC1D28Q2M2D7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D28Q2M2D7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D28Q2M2D7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D28Q2M2D7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D28Q2M2D7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.25■□□□□ 0.83
TBC1D28Q2M2D7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.25■□□□□ 0.83
TBC1D28Q2M2D7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D28Q2M2D7 AC138932.3-201ENST00000567634 1902 ntBASIC20.25■□□□□ 0.83
TBC1D28Q2M2D7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D28Q2M2D7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TBC1D28Q2M2D7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TBC1D28Q2M2D7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
TBC1D28Q2M2D7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TBC1D28Q2M2D7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.24■□□□□ 0.83
TBC1D28Q2M2D7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TBC1D28Q2M2D7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.23■□□□□ 0.83
TBC1D28Q2M2D7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TBC1D28Q2M2D7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TBC1D28Q2M2D7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TBC1D28Q2M2D7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TBC1D28Q2M2D7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TBC1D28Q2M2D7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TBC1D28Q2M2D7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TBC1D28Q2M2D7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TBC1D28Q2M2D7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TBC1D28Q2M2D7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TBC1D28Q2M2D7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TBC1D28Q2M2D7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TBC1D28Q2M2D7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TBC1D28Q2M2D7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.21■□□□□ 0.83
TBC1D28Q2M2D7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TBC1D28Q2M2D7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.21■□□□□ 0.83
TBC1D28Q2M2D7 MIR4281-201ENST00000580852 62 ntBASIC20.21■□□□□ 0.83
TBC1D28Q2M2D7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TBC1D28Q2M2D7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TBC1D28Q2M2D7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TBC1D28Q2M2D7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TBC1D28Q2M2D7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D28Q2M2D7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D28Q2M2D7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D28Q2M2D7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D28Q2M2D7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D28Q2M2D7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TBC1D28Q2M2D7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TBC1D28Q2M2D7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D28Q2M2D7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D28Q2M2D7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TBC1D28Q2M2D7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D28Q2M2D7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D28Q2M2D7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.19■□□□□ 0.82
TBC1D28Q2M2D7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TBC1D28Q2M2D7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.19■□□□□ 0.82
TBC1D28Q2M2D7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.18■□□□□ 0.82
TBC1D28Q2M2D7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TBC1D28Q2M2D7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TBC1D28Q2M2D7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TBC1D28Q2M2D7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.18■□□□□ 0.82
TBC1D28Q2M2D7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TBC1D28Q2M2D7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D28Q2M2D7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D28Q2M2D7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TBC1D28Q2M2D7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D28Q2M2D7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D28Q2M2D7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.17■□□□□ 0.82
TBC1D28Q2M2D7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms