Protein–RNA interactions for Protein: Q01668

CACNA1D, Voltage-dependent L-type calcium channel subunit alpha-1D, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1DQ01668 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CACNA1DQ01668 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1DQ01668 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CACNA1DQ01668 ESRRAP2-201ENST00000418437 1549 ntBASIC20.69■□□□□ 0.9
CACNA1DQ01668 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1DQ01668 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.69■□□□□ 0.9
CACNA1DQ01668 KRT18P10-201ENST00000388836 1287 ntBASIC20.69■□□□□ 0.9
CACNA1DQ01668 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CACNA1DQ01668 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.69■□□□□ 0.9
CACNA1DQ01668 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CACNA1DQ01668 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1DQ01668 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1DQ01668 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CACNA1DQ01668 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.68■□□□□ 0.9
CACNA1DQ01668 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CACNA1DQ01668 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1DQ01668 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA1DQ01668 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CACNA1DQ01668 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA1DQ01668 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.66■□□□□ 0.9
CACNA1DQ01668 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.66■□□□□ 0.9
CACNA1DQ01668 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.66■□□□□ 0.9
CACNA1DQ01668 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CACNA1DQ01668 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA1DQ01668 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.66■□□□□ 0.9
CACNA1DQ01668 AL136967.2-201ENST00000623968 743 ntBASIC20.66■□□□□ 0.9
CACNA1DQ01668 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CACNA1DQ01668 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CACNA1DQ01668 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1DQ01668 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1DQ01668 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1DQ01668 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.65■□□□□ 0.9
CACNA1DQ01668 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.65■□□□□ 0.9
CACNA1DQ01668 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1DQ01668 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.65■□□□□ 0.9
CACNA1DQ01668 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA1DQ01668 AL136162.1-201ENST00000607711 1078 ntBASIC20.65■□□□□ 0.9
CACNA1DQ01668 AP004609.3-201ENST00000610705 1884 ntBASIC20.64■□□□□ 0.9
CACNA1DQ01668 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA1DQ01668 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA1DQ01668 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA1DQ01668 AC142472.1-201ENST00000612013 1741 ntBASIC20.64■□□□□ 0.89
CACNA1DQ01668 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.64■□□□□ 0.89
CACNA1DQ01668 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CACNA1DQ01668 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.63■□□□□ 0.89
CACNA1DQ01668 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA1DQ01668 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.63■□□□□ 0.89
CACNA1DQ01668 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.63■□□□□ 0.89
CACNA1DQ01668 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.63■□□□□ 0.89
CACNA1DQ01668 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA1DQ01668 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA1DQ01668 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA1DQ01668 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.63■□□□□ 0.89
CACNA1DQ01668 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA1DQ01668 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CACNA1DQ01668 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA1DQ01668 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA1DQ01668 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA1DQ01668 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.62■□□□□ 0.89
CACNA1DQ01668 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.62■□□□□ 0.89
CACNA1DQ01668 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA1DQ01668 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA1DQ01668 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA1DQ01668 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA1DQ01668 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.62■□□□□ 0.89
CACNA1DQ01668 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.62■□□□□ 0.89
CACNA1DQ01668 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.61■□□□□ 0.89
CACNA1DQ01668 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA1DQ01668 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA1DQ01668 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CACNA1DQ01668 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA1DQ01668 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.61■□□□□ 0.89
CACNA1DQ01668 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA1DQ01668 AC022517.1-201ENST00000592429 346 ntBASIC20.61■□□□□ 0.89
CACNA1DQ01668 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNA1DQ01668 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNA1DQ01668 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNA1DQ01668 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.6■□□□□ 0.89
CACNA1DQ01668 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNA1DQ01668 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.6■□□□□ 0.89
CACNA1DQ01668 AP001330.3-201ENST00000520123 633 ntBASIC20.6■□□□□ 0.89
CACNA1DQ01668 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.6■□□□□ 0.89
CACNA1DQ01668 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CACNA1DQ01668 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.59■□□□□ 0.89
CACNA1DQ01668 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA1DQ01668 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA1DQ01668 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA1DQ01668 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA1DQ01668 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.59■□□□□ 0.89
CACNA1DQ01668 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA1DQ01668 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.59■□□□□ 0.89
CACNA1DQ01668 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.59■□□□□ 0.89
CACNA1DQ01668 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.59■□□□□ 0.89
CACNA1DQ01668 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA1DQ01668 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CACNA1DQ01668 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA1DQ01668 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.59■□□□□ 0.89
CACNA1DQ01668 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CACNA1DQ01668 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CACNA1DQ01668 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms