Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 KRT18P24-201ENST00000344739 1156 ntBASIC20.44■□□□□ 0.86
NKX6-1P78426 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.44■□□□□ 0.86
NKX6-1P78426 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.44■□□□□ 0.86
NKX6-1P78426 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NKX6-1P78426 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NKX6-1P78426 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
NKX6-1P78426 AC097639.1-201ENST00000565519 1891 ntBASIC20.43■□□□□ 0.86
NKX6-1P78426 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NKX6-1P78426 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX6-1P78426 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.43■□□□□ 0.86
NKX6-1P78426 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.43■□□□□ 0.86
NKX6-1P78426 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.43■□□□□ 0.86
NKX6-1P78426 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NKX6-1P78426 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.43■□□□□ 0.86
NKX6-1P78426 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NKX6-1P78426 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
NKX6-1P78426 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.42■□□□□ 0.86
NKX6-1P78426 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.42■□□□□ 0.86
NKX6-1P78426 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.42■□□□□ 0.86
NKX6-1P78426 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NKX6-1P78426 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NKX6-1P78426 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.42■□□□□ 0.86
NKX6-1P78426 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX6-1P78426 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.41■□□□□ 0.86
NKX6-1P78426 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
NKX6-1P78426 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NKX6-1P78426 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
NKX6-1P78426 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX6-1P78426 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX6-1P78426 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.41■□□□□ 0.86
NKX6-1P78426 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NKX6-1P78426 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NKX6-1P78426 AC145676.1-201ENST00000514988 2004 ntBASIC20.41■□□□□ 0.86
NKX6-1P78426 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.41■□□□□ 0.86
NKX6-1P78426 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NKX6-1P78426 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NKX6-1P78426 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NKX6-1P78426 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.4■□□□□ 0.86
NKX6-1P78426 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.4■□□□□ 0.86
NKX6-1P78426 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
NKX6-1P78426 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NKX6-1P78426 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.4■□□□□ 0.86
NKX6-1P78426 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NKX6-1P78426 AC137630.3-201ENST00000607245 391 ntBASIC20.4■□□□□ 0.86
NKX6-1P78426 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
NKX6-1P78426 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.39■□□□□ 0.85
NKX6-1P78426 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
NKX6-1P78426 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NKX6-1P78426 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NKX6-1P78426 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NKX6-1P78426 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.39■□□□□ 0.85
NKX6-1P78426 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.39■□□□□ 0.85
NKX6-1P78426 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.39■□□□□ 0.85
NKX6-1P78426 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NKX6-1P78426 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NKX6-1P78426 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.38■□□□□ 0.85
NKX6-1P78426 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
NKX6-1P78426 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.38■□□□□ 0.85
NKX6-1P78426 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NKX6-1P78426 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.38■□□□□ 0.85
NKX6-1P78426 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NKX6-1P78426 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NKX6-1P78426 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NKX6-1P78426 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NKX6-1P78426 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
NKX6-1P78426 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NKX6-1P78426 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NKX6-1P78426 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NKX6-1P78426 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.37■□□□□ 0.85
NKX6-1P78426 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.37■□□□□ 0.85
NKX6-1P78426 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NKX6-1P78426 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
NKX6-1P78426 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.36■□□□□ 0.85
NKX6-1P78426 AC021242.3-201ENST00000607598 1377 ntBASIC20.36■□□□□ 0.85
NKX6-1P78426 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NKX6-1P78426 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.36■□□□□ 0.85
NKX6-1P78426 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.36■□□□□ 0.85
NKX6-1P78426 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.36■□□□□ 0.85
NKX6-1P78426 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NKX6-1P78426 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.36■□□□□ 0.85
NKX6-1P78426 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.36■□□□□ 0.85
NKX6-1P78426 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NKX6-1P78426 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.36■□□□□ 0.85
NKX6-1P78426 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NKX6-1P78426 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NKX6-1P78426 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NKX6-1P78426 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.36■□□□□ 0.85
NKX6-1P78426 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NKX6-1P78426 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NKX6-1P78426 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.35■□□□□ 0.85
NKX6-1P78426 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.35■□□□□ 0.85
NKX6-1P78426 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.35■□□□□ 0.85
NKX6-1P78426 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.35■□□□□ 0.85
NKX6-1P78426 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NKX6-1P78426 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NKX6-1P78426 FOXO3B-201ENST00000395675 1928 ntBASIC20.35■□□□□ 0.85
NKX6-1P78426 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NKX6-1P78426 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NKX6-1P78426 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
NKX6-1P78426 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms