Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
ZC3H6P61129 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ZC3H6P61129 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ZC3H6P61129 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ZC3H6P61129 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ZC3H6P61129 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ZC3H6P61129 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC31.65■■■□□ 2.66
ZC3H6P61129 AL136967.2-201ENST00000623968 743 ntBASIC31.65■■■□□ 2.66
ZC3H6P61129 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.65■■■□□ 2.66
ZC3H6P61129 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
ZC3H6P61129 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
ZC3H6P61129 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
ZC3H6P61129 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC31.64■■■□□ 2.66
ZC3H6P61129 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ZC3H6P61129 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ZC3H6P61129 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC31.63■■■□□ 2.65
ZC3H6P61129 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC31.63■■■□□ 2.65
ZC3H6P61129 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.63■■■□□ 2.65
ZC3H6P61129 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
ZC3H6P61129 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ZC3H6P61129 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
ZC3H6P61129 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
ZC3H6P61129 AF213884.3-201ENST00000563833 479 ntBASIC31.62■■■□□ 2.65
ZC3H6P61129 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC31.61■■■□□ 2.65
ZC3H6P61129 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ZC3H6P61129 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ZC3H6P61129 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
ZC3H6P61129 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC31.61■■■□□ 2.65
ZC3H6P61129 GATM-206ENST00000558336 1522 ntTSL 2 BASIC31.6■■■□□ 2.65
ZC3H6P61129 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
ZC3H6P61129 LBH-205ENST00000407930 756 ntTSL 2 BASIC31.6■■■□□ 2.65
ZC3H6P61129 GRAMD4P4-201ENST00000613563 1115 ntBASIC31.6■■■□□ 2.65
ZC3H6P61129 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
ZC3H6P61129 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
ZC3H6P61129 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ZC3H6P61129 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.59■■■□□ 2.65
ZC3H6P61129 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
ZC3H6P61129 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
ZC3H6P61129 STOX2-205ENST00000513034 807 ntTSL 3 BASIC31.59■■■□□ 2.65
ZC3H6P61129 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.58■■■□□ 2.65
ZC3H6P61129 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
ZC3H6P61129 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
ZC3H6P61129 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC31.58■■■□□ 2.65
ZC3H6P61129 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.57■■■□□ 2.65
ZC3H6P61129 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC31.57■■■□□ 2.64
ZC3H6P61129 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
ZC3H6P61129 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ZC3H6P61129 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
ZC3H6P61129 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC31.57■■■□□ 2.64
ZC3H6P61129 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC31.57■■■□□ 2.64
ZC3H6P61129 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
ZC3H6P61129 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
ZC3H6P61129 MIR939-201ENST00000401314 82 ntBASIC31.55■■■□□ 2.64
ZC3H6P61129 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
ZC3H6P61129 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
ZC3H6P61129 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
ZC3H6P61129 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
ZC3H6P61129 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC31.54■■■□□ 2.64
ZC3H6P61129 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ZC3H6P61129 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
ZC3H6P61129 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC31.54■■■□□ 2.64
ZC3H6P61129 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC31.54■■■□□ 2.64
ZC3H6P61129 ANKRD20A6P-201ENST00000618763 204 ntBASIC31.54■■■□□ 2.64
ZC3H6P61129 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC31.54■■■□□ 2.64
ZC3H6P61129 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC31.54■■■□□ 2.64
ZC3H6P61129 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ZC3H6P61129 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
ZC3H6P61129 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ZC3H6P61129 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
ZC3H6P61129 AP001330.3-201ENST00000520123 633 ntBASIC31.53■■■□□ 2.64
ZC3H6P61129 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.53■■■□□ 2.64
ZC3H6P61129 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ZC3H6P61129 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ZC3H6P61129 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ZC3H6P61129 RBM38-205ENST00000440234 686 ntTSL 2 BASIC31.52■■■□□ 2.64
ZC3H6P61129 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ZC3H6P61129 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
ZC3H6P61129 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.52■■■□□ 2.64
ZC3H6P61129 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ZC3H6P61129 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ZC3H6P61129 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.51■■■□□ 2.63
ZC3H6P61129 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC31.51■■■□□ 2.63
ZC3H6P61129 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC31.51■■■□□ 2.63
ZC3H6P61129 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.51■■■□□ 2.63
ZC3H6P61129 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ZC3H6P61129 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ZC3H6P61129 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
ZC3H6P61129 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
ZC3H6P61129 MIR6821-201ENST00000617625 74 ntBASIC31.49■■■□□ 2.63
ZC3H6P61129 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ZC3H6P61129 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ZC3H6P61129 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
ZC3H6P61129 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
ZC3H6P61129 PARL-206ENST00000435888 1098 ntTSL 5 BASIC31.47■■■□□ 2.63
ZC3H6P61129 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC31.47■■■□□ 2.63
ZC3H6P61129 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ZC3H6P61129 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC31.46■■■□□ 2.63
ZC3H6P61129 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC31.46■■■□□ 2.63
ZC3H6P61129 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC31.46■■■□□ 2.63
ZC3H6P61129 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms