Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.65■■□□□ 1.38
WNT3AP56704 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
WNT3AP56704 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
WNT3AP56704 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
WNT3AP56704 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
WNT3AP56704 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.64■■□□□ 1.37
WNT3AP56704 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
WNT3AP56704 AC090877.2-201ENST00000558441 1738 ntBASIC23.64■■□□□ 1.37
WNT3AP56704 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.64■■□□□ 1.37
WNT3AP56704 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
WNT3AP56704 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
WNT3AP56704 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.63■■□□□ 1.37
WNT3AP56704 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
WNT3AP56704 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
WNT3AP56704 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.63■■□□□ 1.37
WNT3AP56704 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.63■■□□□ 1.37
WNT3AP56704 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
WNT3AP56704 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
WNT3AP56704 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
WNT3AP56704 LINC01124-201ENST00000409786 2117 ntBASIC23.62■■□□□ 1.37
WNT3AP56704 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
WNT3AP56704 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
WNT3AP56704 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.62■■□□□ 1.37
WNT3AP56704 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
WNT3AP56704 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.62■■□□□ 1.37
WNT3AP56704 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
WNT3AP56704 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
WNT3AP56704 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.61■■□□□ 1.37
WNT3AP56704 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
WNT3AP56704 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
WNT3AP56704 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
WNT3AP56704 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.61■■□□□ 1.37
WNT3AP56704 AC022616.5-201ENST00000518796 181 ntBASIC23.61■■□□□ 1.37
WNT3AP56704 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.61■■□□□ 1.37
WNT3AP56704 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
WNT3AP56704 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
WNT3AP56704 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
WNT3AP56704 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
WNT3AP56704 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
WNT3AP56704 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
WNT3AP56704 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
WNT3AP56704 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.6■■□□□ 1.37
WNT3AP56704 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.6■■□□□ 1.37
WNT3AP56704 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
WNT3AP56704 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
WNT3AP56704 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.6■■□□□ 1.37
WNT3AP56704 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
WNT3AP56704 HLA-L-211ENST00000482052 1765 ntBASIC23.6■■□□□ 1.37
WNT3AP56704 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
WNT3AP56704 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
WNT3AP56704 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
WNT3AP56704 AC093323.1-202ENST00000635031 2045 ntBASIC23.59■■□□□ 1.37
WNT3AP56704 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
WNT3AP56704 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.59■■□□□ 1.37
WNT3AP56704 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
WNT3AP56704 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
WNT3AP56704 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.59■■□□□ 1.37
WNT3AP56704 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.58■■□□□ 1.37
WNT3AP56704 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.58■■□□□ 1.37
WNT3AP56704 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
WNT3AP56704 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.58■■□□□ 1.37
WNT3AP56704 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
WNT3AP56704 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.58■■□□□ 1.36
WNT3AP56704 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
WNT3AP56704 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
WNT3AP56704 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.57■■□□□ 1.36
WNT3AP56704 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.57■■□□□ 1.36
WNT3AP56704 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
WNT3AP56704 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
WNT3AP56704 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.57■■□□□ 1.36
WNT3AP56704 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
WNT3AP56704 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
WNT3AP56704 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
WNT3AP56704 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
WNT3AP56704 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
WNT3AP56704 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
WNT3AP56704 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
WNT3AP56704 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
WNT3AP56704 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
WNT3AP56704 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.56■■□□□ 1.36
WNT3AP56704 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
WNT3AP56704 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.55■■□□□ 1.36
WNT3AP56704 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.55■■□□□ 1.36
WNT3AP56704 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
WNT3AP56704 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
WNT3AP56704 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.55■■□□□ 1.36
WNT3AP56704 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.55■■□□□ 1.36
WNT3AP56704 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.55■■□□□ 1.36
WNT3AP56704 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.55■■□□□ 1.36
WNT3AP56704 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
WNT3AP56704 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
WNT3AP56704 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
WNT3AP56704 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
WNT3AP56704 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
WNT3AP56704 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
WNT3AP56704 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
WNT3AP56704 AC011551.1-201ENST00000614101 683 ntBASIC23.54■■□□□ 1.36
WNT3AP56704 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
WNT3AP56704 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.54■■□□□ 1.36
WNT3AP56704 LINC00543-201ENST00000567234 1845 ntBASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms