Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
KCNQ4P56696 AC097381.1-201ENST00000429019 1296 ntBASIC30.26■■■□□ 2.43
KCNQ4P56696 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
KCNQ4P56696 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
KCNQ4P56696 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
KCNQ4P56696 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.25■■■□□ 2.43
KCNQ4P56696 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.25■■■□□ 2.43
KCNQ4P56696 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
KCNQ4P56696 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
KCNQ4P56696 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
KCNQ4P56696 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.24■■■□□ 2.43
KCNQ4P56696 GATM-206ENST00000558336 1522 ntTSL 2 BASIC30.24■■■□□ 2.43
KCNQ4P56696 MAG-206ENST00000597035 542 ntTSL 4 BASIC30.24■■■□□ 2.43
KCNQ4P56696 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
KCNQ4P56696 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
KCNQ4P56696 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC30.23■■■□□ 2.43
KCNQ4P56696 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC30.23■■■□□ 2.43
KCNQ4P56696 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
KCNQ4P56696 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
KCNQ4P56696 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
KCNQ4P56696 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
KCNQ4P56696 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
KCNQ4P56696 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
KCNQ4P56696 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
KCNQ4P56696 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
KCNQ4P56696 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
KCNQ4P56696 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
KCNQ4P56696 PLD4-205ENST00000553861 667 ntTSL 2 BASIC30.21■■■□□ 2.43
KCNQ4P56696 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
KCNQ4P56696 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC30.2■■■□□ 2.43
KCNQ4P56696 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
KCNQ4P56696 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.42
KCNQ4P56696 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
KCNQ4P56696 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
KCNQ4P56696 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
KCNQ4P56696 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
KCNQ4P56696 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
KCNQ4P56696 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
KCNQ4P56696 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
KCNQ4P56696 GLI3-203ENST00000437480 451 ntTSL 2 BASIC30.18■■■□□ 2.42
KCNQ4P56696 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC30.18■■■□□ 2.42
KCNQ4P56696 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
KCNQ4P56696 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
KCNQ4P56696 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
KCNQ4P56696 AC090877.2-201ENST00000558441 1738 ntBASIC30.17■■■□□ 2.42
KCNQ4P56696 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
KCNQ4P56696 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
KCNQ4P56696 MIR4767-201ENST00000582827 78 ntBASIC30.17■■■□□ 2.42
KCNQ4P56696 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
KCNQ4P56696 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
KCNQ4P56696 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.15■■■□□ 2.42
KCNQ4P56696 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC30.15■■■□□ 2.42
KCNQ4P56696 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
KCNQ4P56696 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
KCNQ4P56696 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
KCNQ4P56696 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
KCNQ4P56696 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
KCNQ4P56696 AC091305.1-201ENST00000479476 895 ntBASIC30.14■■■□□ 2.42
KCNQ4P56696 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC30.14■■■□□ 2.42
KCNQ4P56696 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
KCNQ4P56696 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC30.13■■■□□ 2.41
KCNQ4P56696 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC30.13■■■□□ 2.41
KCNQ4P56696 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
KCNQ4P56696 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
KCNQ4P56696 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
KCNQ4P56696 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
KCNQ4P56696 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
KCNQ4P56696 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.12■■■□□ 2.41
KCNQ4P56696 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC30.12■■■□□ 2.41
KCNQ4P56696 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC30.12■■■□□ 2.41
KCNQ4P56696 CA15P2-201ENST00000611168 834 ntBASIC30.12■■■□□ 2.41
KCNQ4P56696 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
KCNQ4P56696 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.11■■■□□ 2.41
KCNQ4P56696 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC30.11■■■□□ 2.41
KCNQ4P56696 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC30.1■■■□□ 2.41
KCNQ4P56696 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
KCNQ4P56696 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.1■■■□□ 2.41
KCNQ4P56696 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
KCNQ4P56696 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC30.09■■■□□ 2.41
KCNQ4P56696 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC30.08■■■□□ 2.41
KCNQ4P56696 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
KCNQ4P56696 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
KCNQ4P56696 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
KCNQ4P56696 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.08■■■□□ 2.41
KCNQ4P56696 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.07■■■□□ 2.4
KCNQ4P56696 PTMA-205ENST00000410064 814 ntTSL 2 BASIC30.07■■■□□ 2.4
KCNQ4P56696 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC30.07■■■□□ 2.4
KCNQ4P56696 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
KCNQ4P56696 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC30.07■■■□□ 2.4
KCNQ4P56696 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
KCNQ4P56696 SYT6-210ENST00000641643 1587 ntBASIC30.07■■■□□ 2.4
KCNQ4P56696 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC30.06■■■□□ 2.4
KCNQ4P56696 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
KCNQ4P56696 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
KCNQ4P56696 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
KCNQ4P56696 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
KCNQ4P56696 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
KCNQ4P56696 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
KCNQ4P56696 SERBP1P1-201ENST00000396021 1160 ntBASIC30.05■■■□□ 2.4
KCNQ4P56696 AC004448.1-201ENST00000458332 883 ntBASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms