Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGA2P52926 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGA2P52926 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGA2P52926 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HMGA2P52926 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMGA2P52926 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGA2P52926 KRT18P10-201ENST00000388836 1287 ntBASIC21.39■■□□□ 1.01
HMGA2P52926 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGA2P52926 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.39■■□□□ 1.01
HMGA2P52926 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGA2P52926 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMGA2P52926 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMGA2P52926 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGA2P52926 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGA2P52926 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGA2P52926 FOXO3B-201ENST00000395675 1928 ntBASIC21.38■■□□□ 1.01
HMGA2P52926 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.38■■□□□ 1.01
HMGA2P52926 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGA2P52926 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.37■■□□□ 1.01
HMGA2P52926 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGA2P52926 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMGA2P52926 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGA2P52926 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGA2P52926 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.37■■□□□ 1.01
HMGA2P52926 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.37■■□□□ 1.01
HMGA2P52926 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGA2P52926 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGA2P52926 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMGA2P52926 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMGA2P52926 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMGA2P52926 AC093536.1-201ENST00000569153 554 ntBASIC21.36■■□□□ 1.01
HMGA2P52926 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGA2P52926 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGA2P52926 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGA2P52926 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
HMGA2P52926 AC079834.2-201ENST00000609776 1949 ntBASIC21.35■■□□□ 1.01
HMGA2P52926 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.35■■□□□ 1.01
HMGA2P52926 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.35■■□□□ 1.01
HMGA2P52926 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.35■■□□□ 1.01
HMGA2P52926 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGA2P52926 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGA2P52926 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGA2P52926 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGA2P52926 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.35■■□□□ 1.01
HMGA2P52926 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.35■■□□□ 1.01
HMGA2P52926 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HMGA2P52926 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGA2P52926 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGA2P52926 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGA2P52926 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
HMGA2P52926 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HMGA2P52926 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HMGA2P52926 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
HMGA2P52926 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGA2P52926 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HMGA2P52926 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HMGA2P52926 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HMGA2P52926 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.33■■□□□ 1.01
HMGA2P52926 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.33■■□□□ 1.01
HMGA2P52926 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
HMGA2P52926 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.33■■□□□ 1.01
HMGA2P52926 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
HMGA2P52926 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
HMGA2P52926 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HMGA2P52926 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
HMGA2P52926 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HMGA2P52926 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.32■■□□□ 1
HMGA2P52926 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.32■■□□□ 1
HMGA2P52926 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HMGA2P52926 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HMGA2P52926 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
HMGA2P52926 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.32■■□□□ 1
HMGA2P52926 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.32■■□□□ 1
HMGA2P52926 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HMGA2P52926 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.32■■□□□ 1
HMGA2P52926 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HMGA2P52926 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.31■■□□□ 1
HMGA2P52926 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HMGA2P52926 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
HMGA2P52926 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.31■■□□□ 1
HMGA2P52926 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.31■■□□□ 1
HMGA2P52926 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HMGA2P52926 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
HMGA2P52926 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HMGA2P52926 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.3■■□□□ 1
HMGA2P52926 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.3■■□□□ 1
HMGA2P52926 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGA2P52926 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.3■■□□□ 1
HMGA2P52926 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.3■■□□□ 1
HMGA2P52926 RAP2CP1-202ENST00000605179 643 ntBASIC21.3■■□□□ 1
HMGA2P52926 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
HMGA2P52926 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.3■■□□□ 1
HMGA2P52926 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.3■■□□□ 1
HMGA2P52926 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.3■■□□□ 1
HMGA2P52926 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.29■■□□□ 1
HMGA2P52926 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.29■■□□□ 1
HMGA2P52926 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGA2P52926 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
HMGA2P52926 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.29■■□□□ 1
HMGA2P52926 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms