Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP24386 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.73■■□□□ 1.07
CHMP24386 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP24386 AC139795.1-202ENST00000500444 432 ntBASIC21.73■■□□□ 1.07
CHMP24386 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.73■■□□□ 1.07
CHMP24386 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP24386 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CHMP24386 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHMP24386 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.73■■□□□ 1.07
CHMP24386 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP24386 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP24386 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP24386 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP24386 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
CHMP24386 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP24386 BHLHE23-202ENST00000612929 1109 ntBASIC21.72■■□□□ 1.07
CHMP24386 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP24386 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHMP24386 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP24386 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.71■■□□□ 1.07
CHMP24386 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP24386 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
CHMP24386 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHMP24386 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP24386 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP24386 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP24386 AC133561.1-201ENST00000568600 2415 ntBASIC21.7■■□□□ 1.06
CHMP24386 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP24386 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.7■■□□□ 1.06
CHMP24386 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHMP24386 RPS2P7-201ENST00000447334 885 ntBASIC21.69■■□□□ 1.06
CHMP24386 AC087393.1-201ENST00000582896 145 ntBASIC21.69■■□□□ 1.06
CHMP24386 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP24386 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP24386 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP24386 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHMP24386 AC012676.1-201ENST00000574705 1949 ntBASIC21.68■■□□□ 1.06
CHMP24386 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.68■■□□□ 1.06
CHMP24386 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.68■■□□□ 1.06
CHMP24386 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.68■■□□□ 1.06
CHMP24386 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP24386 LINC00543-201ENST00000567234 1845 ntBASIC21.68■■□□□ 1.06
CHMP24386 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP24386 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP24386 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CHMP24386 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP24386 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP24386 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CHMP24386 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CHMP24386 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CHMP24386 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.67■■□□□ 1.06
CHMP24386 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP24386 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.67■■□□□ 1.06
CHMP24386 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP24386 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP24386 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.67■■□□□ 1.06
CHMP24386 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.67■■□□□ 1.06
CHMP24386 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP24386 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.66■■□□□ 1.06
CHMP24386 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
CHMP24386 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP24386 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP24386 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP24386 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP24386 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP24386 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CHMP24386 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP24386 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CHMP24386 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
CHMP24386 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CHMP24386 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP24386 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP24386 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMP24386 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP24386 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.65■■□□□ 1.06
CHMP24386 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP24386 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.65■■□□□ 1.06
CHMP24386 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP24386 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CHMP24386 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.64■■□□□ 1.05
CHMP24386 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
CHMP24386 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP24386 AC019171.1-201ENST00000601251 1056 ntBASIC21.64■■□□□ 1.05
CHMP24386 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.64■■□□□ 1.05
CHMP24386 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.64■■□□□ 1.05
CHMP24386 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP24386 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CHMP24386 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP24386 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMP24386 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP24386 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMP24386 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP24386 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP24386 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP24386 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP24386 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP24386 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP24386 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.62■■□□□ 1.05
CHMP24386 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.62■■□□□ 1.05
CHMP24386 AC010980.1-201ENST00000587192 1142 ntBASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms