Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TNFSF4P23510 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.88■□□□□ 0.77
TNFSF4P23510 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TNFSF4P23510 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF4P23510 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.87■□□□□ 0.77
TNFSF4P23510 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF4P23510 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF4P23510 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TNFSF4P23510 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.87■□□□□ 0.77
TNFSF4P23510 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TNFSF4P23510 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF4P23510 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFSF4P23510 BX664725.1-201ENST00000438252 379 ntBASIC19.86■□□□□ 0.77
TNFSF4P23510 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.86■□□□□ 0.77
TNFSF4P23510 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.86■□□□□ 0.77
TNFSF4P23510 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TNFSF4P23510 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.86■□□□□ 0.77
TNFSF4P23510 AL451085.2-201ENST00000605085 799 ntBASIC19.86■□□□□ 0.77
TNFSF4P23510 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF4P23510 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.86■□□□□ 0.77
TNFSF4P23510 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.86■□□□□ 0.77
TNFSF4P23510 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF4P23510 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.86■□□□□ 0.77
TNFSF4P23510 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TNFSF4P23510 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TNFSF4P23510 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFSF4P23510 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.85■□□□□ 0.77
TNFSF4P23510 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF4P23510 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.85■□□□□ 0.77
TNFSF4P23510 MIR4281-201ENST00000580852 62 ntBASIC19.85■□□□□ 0.77
TNFSF4P23510 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TNFSF4P23510 MIR6089-201ENST00000616698 64 ntBASIC19.85■□□□□ 0.77
TNFSF4P23510 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFSF4P23510 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFSF4P23510 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
TNFSF4P23510 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.85■□□□□ 0.77
TNFSF4P23510 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFSF4P23510 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF4P23510 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF4P23510 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFSF4P23510 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF4P23510 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFSF4P23510 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF4P23510 AC009299.2-201ENST00000482477 511 ntBASIC19.84■□□□□ 0.77
TNFSF4P23510 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF4P23510 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TNFSF4P23510 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFSF4P23510 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TNFSF4P23510 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFSF4P23510 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF4P23510 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
TNFSF4P23510 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF4P23510 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF4P23510 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
TNFSF4P23510 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TNFSF4P23510 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF4P23510 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF4P23510 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF4P23510 KRT125P-201ENST00000546827 989 ntBASIC19.83■□□□□ 0.77
TNFSF4P23510 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TNFSF4P23510 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.83■□□□□ 0.76
TNFSF4P23510 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF4P23510 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF4P23510 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.83■□□□□ 0.76
TNFSF4P23510 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TNFSF4P23510 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF4P23510 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF4P23510 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF4P23510 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF4P23510 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF4P23510 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
TNFSF4P23510 Z92544.1-202ENST00000571933 1220 ntBASIC19.82■□□□□ 0.76
TNFSF4P23510 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TNFSF4P23510 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFSF4P23510 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.82■□□□□ 0.76
TNFSF4P23510 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TNFSF4P23510 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF4P23510 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TNFSF4P23510 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF4P23510 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF4P23510 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF4P23510 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF4P23510 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFSF4P23510 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TNFSF4P23510 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.8■□□□□ 0.76
TNFSF4P23510 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF4P23510 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF4P23510 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TNFSF4P23510 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF4P23510 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF4P23510 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
TNFSF4P23510 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TNFSF4P23510 AL035685.1-201ENST00000636663 812 ntBASIC19.8■□□□□ 0.76
TNFSF4P23510 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF4P23510 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF4P23510 AC022211.4-201ENST00000625094 2161 ntBASIC19.8■□□□□ 0.76
TNFSF4P23510 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF4P23510 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF4P23510 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF4P23510 AC137630.3-201ENST00000607245 391 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms