Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
KCNA3P22001 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC29.14■■■□□ 2.26
KCNA3P22001 AP004609.3-201ENST00000610705 1884 ntBASIC29.14■■■□□ 2.26
KCNA3P22001 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
KCNA3P22001 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC29.13■■■□□ 2.25
KCNA3P22001 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
KCNA3P22001 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
KCNA3P22001 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
KCNA3P22001 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
KCNA3P22001 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
KCNA3P22001 LBH-205ENST00000407930 756 ntTSL 2 BASIC29.12■■■□□ 2.25
KCNA3P22001 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
KCNA3P22001 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
KCNA3P22001 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.12■■■□□ 2.25
KCNA3P22001 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
KCNA3P22001 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
KCNA3P22001 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
KCNA3P22001 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC29.11■■■□□ 2.25
KCNA3P22001 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC29.11■■■□□ 2.25
KCNA3P22001 JTB-203ENST00000368589 1216 ntTSL 2 BASIC29.1■■■□□ 2.25
KCNA3P22001 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC29.1■■■□□ 2.25
KCNA3P22001 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC29.1■■■□□ 2.25
KCNA3P22001 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
KCNA3P22001 AC090877.2-201ENST00000558441 1738 ntBASIC29.09■■■□□ 2.25
KCNA3P22001 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
KCNA3P22001 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
KCNA3P22001 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
KCNA3P22001 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.08■■■□□ 2.25
KCNA3P22001 IRS3P-201ENST00000223076 1006 ntBASIC29.07■■■□□ 2.24
KCNA3P22001 PTMA-205ENST00000410064 814 ntTSL 2 BASIC29.07■■■□□ 2.24
KCNA3P22001 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
KCNA3P22001 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC29.07■■■□□ 2.24
KCNA3P22001 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC29.07■■■□□ 2.24
KCNA3P22001 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC29.07■■■□□ 2.24
KCNA3P22001 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
KCNA3P22001 SYT6-210ENST00000641643 1587 ntBASIC29.07■■■□□ 2.24
KCNA3P22001 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
KCNA3P22001 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC29.06■■■□□ 2.24
KCNA3P22001 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC29.06■■■□□ 2.24
KCNA3P22001 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC29.06■■■□□ 2.24
KCNA3P22001 IKBKGP1-201ENST00000612193 1073 ntBASIC29.06■■■□□ 2.24
KCNA3P22001 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC29.06■■■□□ 2.24
KCNA3P22001 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
KCNA3P22001 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
KCNA3P22001 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
KCNA3P22001 SERBP1P1-201ENST00000396021 1160 ntBASIC29.05■■■□□ 2.24
KCNA3P22001 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC29.05■■■□□ 2.24
KCNA3P22001 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC29.05■■■□□ 2.24
KCNA3P22001 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
KCNA3P22001 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.04■■■□□ 2.24
KCNA3P22001 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
KCNA3P22001 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.04■■■□□ 2.24
KCNA3P22001 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
KCNA3P22001 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC29.03■■■□□ 2.24
KCNA3P22001 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
KCNA3P22001 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
KCNA3P22001 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
KCNA3P22001 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
KCNA3P22001 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC29.03■■■□□ 2.24
KCNA3P22001 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
KCNA3P22001 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
KCNA3P22001 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
KCNA3P22001 RHOF-204ENST00000537265 699 ntTSL 2 BASIC29.02■■■□□ 2.24
KCNA3P22001 AC027682.1-201ENST00000562846 899 ntBASIC29.02■■■□□ 2.24
KCNA3P22001 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC29.02■■■□□ 2.24
KCNA3P22001 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
KCNA3P22001 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC29.01■■■□□ 2.23
KCNA3P22001 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC29.01■■■□□ 2.23
KCNA3P22001 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
KCNA3P22001 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
KCNA3P22001 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
KCNA3P22001 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
KCNA3P22001 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC29■■■□□ 2.23
KCNA3P22001 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.99■■■□□ 2.23
KCNA3P22001 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
KCNA3P22001 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC28.99■■■□□ 2.23
KCNA3P22001 AC022517.1-201ENST00000592429 346 ntBASIC28.99■■■□□ 2.23
KCNA3P22001 AC008764.7-201ENST00000593779 1081 ntBASIC28.99■■■□□ 2.23
KCNA3P22001 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
KCNA3P22001 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
KCNA3P22001 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC28.99■■■□□ 2.23
KCNA3P22001 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
KCNA3P22001 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
KCNA3P22001 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.98■■■□□ 2.23
KCNA3P22001 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
KCNA3P22001 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
KCNA3P22001 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
KCNA3P22001 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
KCNA3P22001 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
KCNA3P22001 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
KCNA3P22001 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
KCNA3P22001 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
KCNA3P22001 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC28.97■■■□□ 2.23
KCNA3P22001 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC28.97■■■□□ 2.23
KCNA3P22001 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC28.97■■■□□ 2.23
KCNA3P22001 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC28.97■■■□□ 2.23
KCNA3P22001 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
KCNA3P22001 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
KCNA3P22001 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC28.96■■■□□ 2.23
KCNA3P22001 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC28.96■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms