Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIST1H1CP16403 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIST1H1CP16403 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIST1H1CP16403 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HIST1H1CP16403 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.93■□□□□ 0.94
HIST1H1CP16403 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIST1H1CP16403 ABCB10P4-201ENST00000566803 2184 ntBASIC20.93■□□□□ 0.94
HIST1H1CP16403 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HIST1H1CP16403 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HIST1H1CP16403 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
HIST1H1CP16403 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIST1H1CP16403 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.92■□□□□ 0.94
HIST1H1CP16403 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIST1H1CP16403 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIST1H1CP16403 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIST1H1CP16403 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIST1H1CP16403 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIST1H1CP16403 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HIST1H1CP16403 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HIST1H1CP16403 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H1CP16403 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.9■□□□□ 0.94
HIST1H1CP16403 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H1CP16403 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HIST1H1CP16403 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H1CP16403 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.9■□□□□ 0.94
HIST1H1CP16403 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H1CP16403 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H1CP16403 RNF126P1-201ENST00000567452 1320 ntBASIC20.9■□□□□ 0.94
HIST1H1CP16403 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.9■□□□□ 0.94
HIST1H1CP16403 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
HIST1H1CP16403 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
HIST1H1CP16403 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H1CP16403 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.89■□□□□ 0.94
HIST1H1CP16403 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIST1H1CP16403 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIST1H1CP16403 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIST1H1CP16403 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
HIST1H1CP16403 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIST1H1CP16403 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIST1H1CP16403 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H1CP16403 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H1CP16403 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H1CP16403 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HIST1H1CP16403 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.88■□□□□ 0.93
HIST1H1CP16403 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H1CP16403 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.88■□□□□ 0.93
HIST1H1CP16403 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H1CP16403 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H1CP16403 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H1CP16403 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIST1H1CP16403 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIST1H1CP16403 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.87■□□□□ 0.93
HIST1H1CP16403 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HIST1H1CP16403 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
HIST1H1CP16403 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIST1H1CP16403 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.87■□□□□ 0.93
HIST1H1CP16403 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIST1H1CP16403 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIST1H1CP16403 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIST1H1CP16403 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.86■□□□□ 0.93
HIST1H1CP16403 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HIST1H1CP16403 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.86■□□□□ 0.93
HIST1H1CP16403 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIST1H1CP16403 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H1CP16403 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
HIST1H1CP16403 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H1CP16403 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
HIST1H1CP16403 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.85■□□□□ 0.93
HIST1H1CP16403 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HIST1H1CP16403 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H1CP16403 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HIST1H1CP16403 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H1CP16403 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H1CP16403 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HIST1H1CP16403 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
HIST1H1CP16403 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H1CP16403 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H1CP16403 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.84■□□□□ 0.93
HIST1H1CP16403 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HIST1H1CP16403 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H1CP16403 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.84■□□□□ 0.93
HIST1H1CP16403 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H1CP16403 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H1CP16403 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H1CP16403 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HIST1H1CP16403 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H1CP16403 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H1CP16403 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H1CP16403 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HIST1H1CP16403 RPS2P7-201ENST00000447334 885 ntBASIC20.83■□□□□ 0.93
HIST1H1CP16403 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HIST1H1CP16403 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.83■□□□□ 0.93
HIST1H1CP16403 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HIST1H1CP16403 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
HIST1H1CP16403 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.83■□□□□ 0.92
HIST1H1CP16403 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HIST1H1CP16403 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HIST1H1CP16403 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HIST1H1CP16403 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HIST1H1CP16403 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms