Protein–RNA interactions for Protein: P15172

MYOD1, Myoblast determination protein 1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYOD1P15172 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MYOD1P15172 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MYOD1P15172 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MYOD1P15172 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MYOD1P15172 AL592293.1-201ENST00000502889 1188 ntBASIC18.71■□□□□ 0.59
MYOD1P15172 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MYOD1P15172 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MYOD1P15172 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MYOD1P15172 ABCB10P4-201ENST00000566803 2184 ntBASIC18.71■□□□□ 0.59
MYOD1P15172 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MYOD1P15172 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.7■□□□□ 0.58
MYOD1P15172 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.7■□□□□ 0.58
MYOD1P15172 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.69■□□□□ 0.58
MYOD1P15172 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MYOD1P15172 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MYOD1P15172 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MYOD1P15172 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MYOD1P15172 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MYOD1P15172 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MYOD1P15172 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
MYOD1P15172 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MYOD1P15172 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MYOD1P15172 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MYOD1P15172 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.69■□□□□ 0.58
MYOD1P15172 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MYOD1P15172 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MYOD1P15172 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MYOD1P15172 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MYOD1P15172 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MYOD1P15172 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MYOD1P15172 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MYOD1P15172 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MYOD1P15172 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MYOD1P15172 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MYOD1P15172 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.68■□□□□ 0.58
MYOD1P15172 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.68■□□□□ 0.58
MYOD1P15172 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MYOD1P15172 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MYOD1P15172 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
MYOD1P15172 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MYOD1P15172 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MYOD1P15172 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MYOD1P15172 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MYOD1P15172 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MYOD1P15172 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MYOD1P15172 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.66■□□□□ 0.58
MYOD1P15172 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MYOD1P15172 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MYOD1P15172 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MYOD1P15172 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.66■□□□□ 0.58
MYOD1P15172 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.66■□□□□ 0.58
MYOD1P15172 AC141586.4-201ENST00000624558 1573 ntBASIC18.66■□□□□ 0.58
MYOD1P15172 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.66■□□□□ 0.58
MYOD1P15172 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.66■□□□□ 0.58
MYOD1P15172 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MYOD1P15172 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MYOD1P15172 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MYOD1P15172 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MYOD1P15172 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MYOD1P15172 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.66■□□□□ 0.58
MYOD1P15172 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MYOD1P15172 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MYOD1P15172 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MYOD1P15172 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MYOD1P15172 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
MYOD1P15172 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MYOD1P15172 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MYOD1P15172 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.64■□□□□ 0.57
MYOD1P15172 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.64■□□□□ 0.57
MYOD1P15172 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
MYOD1P15172 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.64■□□□□ 0.57
MYOD1P15172 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MYOD1P15172 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MYOD1P15172 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MYOD1P15172 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MYOD1P15172 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.63■□□□□ 0.57
MYOD1P15172 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MYOD1P15172 RARRES2P2-201ENST00000394842 485 ntBASIC18.63■□□□□ 0.57
MYOD1P15172 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MYOD1P15172 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
MYOD1P15172 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.63■□□□□ 0.57
MYOD1P15172 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MYOD1P15172 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.63■□□□□ 0.57
MYOD1P15172 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.63■□□□□ 0.57
MYOD1P15172 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MYOD1P15172 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.63■□□□□ 0.57
MYOD1P15172 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MYOD1P15172 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MYOD1P15172 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MYOD1P15172 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.62■□□□□ 0.57
MYOD1P15172 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MYOD1P15172 RPS2P7-201ENST00000447334 885 ntBASIC18.62■□□□□ 0.57
MYOD1P15172 HSD17B1P1-201ENST00000590052 955 ntBASIC18.62■□□□□ 0.57
MYOD1P15172 U85056.1-201ENST00000616429 682 ntBASIC18.62■□□□□ 0.57
MYOD1P15172 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.62■□□□□ 0.57
MYOD1P15172 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MYOD1P15172 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MYOD1P15172 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.62■□□□□ 0.57
MYOD1P15172 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MYOD1P15172 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms