Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
COL11A2P13942 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
COL11A2P13942 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
COL11A2P13942 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
COL11A2P13942 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC29.13■■■□□ 2.25
COL11A2P13942 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
COL11A2P13942 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
COL11A2P13942 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
COL11A2P13942 GRAMD4P4-201ENST00000613563 1115 ntBASIC29.11■■■□□ 2.25
COL11A2P13942 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
COL11A2P13942 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC29.1■■■□□ 2.25
COL11A2P13942 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
COL11A2P13942 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
COL11A2P13942 AC090877.2-201ENST00000558441 1738 ntBASIC29.1■■■□□ 2.25
COL11A2P13942 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
COL11A2P13942 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC29.1■■■□□ 2.25
COL11A2P13942 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC29.1■■■□□ 2.25
COL11A2P13942 GATM-206ENST00000558336 1522 ntTSL 2 BASIC29.09■■■□□ 2.25
COL11A2P13942 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
COL11A2P13942 PTMA-205ENST00000410064 814 ntTSL 2 BASIC29.09■■■□□ 2.25
COL11A2P13942 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC29.09■■■□□ 2.25
COL11A2P13942 SRD5A1P1-201ENST00000442297 786 ntBASIC29.08■■■□□ 2.25
COL11A2P13942 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC29.08■■■□□ 2.25
COL11A2P13942 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
COL11A2P13942 ANKRD20A6P-201ENST00000618763 204 ntBASIC29.08■■■□□ 2.25
COL11A2P13942 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
COL11A2P13942 LBH-205ENST00000407930 756 ntTSL 2 BASIC29.08■■■□□ 2.25
COL11A2P13942 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
COL11A2P13942 SF1-220ENST00000626028 704 ntTSL 2 BASIC29.08■■■□□ 2.25
COL11A2P13942 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC29.07■■■□□ 2.24
COL11A2P13942 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
COL11A2P13942 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC29.07■■■□□ 2.24
COL11A2P13942 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
COL11A2P13942 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC29.07■■■□□ 2.24
COL11A2P13942 AL355001.2-201ENST00000620617 1191 ntBASIC29.07■■■□□ 2.24
COL11A2P13942 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
COL11A2P13942 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
COL11A2P13942 AL136967.2-201ENST00000623968 743 ntBASIC29.06■■■□□ 2.24
COL11A2P13942 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL11A2P13942 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
COL11A2P13942 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL11A2P13942 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL11A2P13942 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL11A2P13942 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL11A2P13942 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
COL11A2P13942 AC096887.2-201ENST00000623443 1957 ntBASIC29.05■■■□□ 2.24
COL11A2P13942 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.05■■■□□ 2.24
COL11A2P13942 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
COL11A2P13942 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
COL11A2P13942 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
COL11A2P13942 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
COL11A2P13942 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
COL11A2P13942 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL11A2P13942 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC29.03■■■□□ 2.24
COL11A2P13942 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC29.03■■■□□ 2.24
COL11A2P13942 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC29.03■■■□□ 2.24
COL11A2P13942 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
COL11A2P13942 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL11A2P13942 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
COL11A2P13942 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
COL11A2P13942 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
COL11A2P13942 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC29.02■■■□□ 2.24
COL11A2P13942 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC29.02■■■□□ 2.24
COL11A2P13942 MIR6821-201ENST00000617625 74 ntBASIC29.02■■■□□ 2.24
COL11A2P13942 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
COL11A2P13942 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
COL11A2P13942 AC087623.3-201ENST00000607047 1098 ntBASIC29.01■■■□□ 2.23
COL11A2P13942 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
COL11A2P13942 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
COL11A2P13942 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC29.01■■■□□ 2.23
COL11A2P13942 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
COL11A2P13942 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC29■■■□□ 2.23
COL11A2P13942 HYI-206ENST00000372434 1025 ntTSL 5 BASIC29■■■□□ 2.23
COL11A2P13942 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC29■■■□□ 2.23
COL11A2P13942 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC29■■■□□ 2.23
COL11A2P13942 STOX2-205ENST00000513034 807 ntTSL 3 BASIC29■■■□□ 2.23
COL11A2P13942 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
COL11A2P13942 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC28.99■■■□□ 2.23
COL11A2P13942 AC097381.1-201ENST00000429019 1296 ntBASIC28.99■■■□□ 2.23
COL11A2P13942 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC28.99■■■□□ 2.23
COL11A2P13942 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
COL11A2P13942 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
COL11A2P13942 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
COL11A2P13942 MIR4767-201ENST00000582827 78 ntBASIC28.98■■■□□ 2.23
COL11A2P13942 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC28.98■■■□□ 2.23
COL11A2P13942 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
COL11A2P13942 PTCHD3P2-201ENST00000424937 1205 ntBASIC28.97■■■□□ 2.23
COL11A2P13942 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
COL11A2P13942 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
COL11A2P13942 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
COL11A2P13942 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
COL11A2P13942 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC28.97■■■□□ 2.23
COL11A2P13942 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.97■■■□□ 2.23
COL11A2P13942 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC28.96■■■□□ 2.23
COL11A2P13942 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL11A2P13942 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
COL11A2P13942 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC28.96■■■□□ 2.23
COL11A2P13942 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC28.96■■■□□ 2.23
COL11A2P13942 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL11A2P13942 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms