Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
SP9P0CG40 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SP9P0CG40 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.44■■□□□ 1.34
SP9P0CG40 AC022517.1-201ENST00000592429 346 ntBASIC23.44■■□□□ 1.34
SP9P0CG40 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.44■■□□□ 1.34
SP9P0CG40 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SP9P0CG40 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SP9P0CG40 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
SP9P0CG40 FOXO3B-201ENST00000395675 1928 ntBASIC23.43■■□□□ 1.34
SP9P0CG40 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
SP9P0CG40 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.43■■□□□ 1.34
SP9P0CG40 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.43■■□□□ 1.34
SP9P0CG40 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.43■■□□□ 1.34
SP9P0CG40 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.43■■□□□ 1.34
SP9P0CG40 AC008764.7-201ENST00000593779 1081 ntBASIC23.43■■□□□ 1.34
SP9P0CG40 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SP9P0CG40 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
SP9P0CG40 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SP9P0CG40 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SP9P0CG40 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SP9P0CG40 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SP9P0CG40 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SP9P0CG40 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SP9P0CG40 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
SP9P0CG40 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
SP9P0CG40 SERBP1P1-201ENST00000396021 1160 ntBASIC23.42■■□□□ 1.34
SP9P0CG40 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.42■■□□□ 1.34
SP9P0CG40 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.42■■□□□ 1.34
SP9P0CG40 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SP9P0CG40 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SP9P0CG40 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SP9P0CG40 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.41■■□□□ 1.34
SP9P0CG40 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
SP9P0CG40 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.41■■□□□ 1.34
SP9P0CG40 AL137784.2-201ENST00000607332 1000 ntBASIC23.41■■□□□ 1.34
SP9P0CG40 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
SP9P0CG40 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
SP9P0CG40 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
SP9P0CG40 AC090877.2-201ENST00000558441 1738 ntBASIC23.4■■□□□ 1.34
SP9P0CG40 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.4■■□□□ 1.34
SP9P0CG40 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.4■■□□□ 1.34
SP9P0CG40 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
SP9P0CG40 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SP9P0CG40 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
SP9P0CG40 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
SP9P0CG40 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
SP9P0CG40 AC034268.1-201ENST00000441047 882 ntBASIC23.39■■□□□ 1.33
SP9P0CG40 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.39■■□□□ 1.33
SP9P0CG40 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.39■■□□□ 1.33
SP9P0CG40 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.39■■□□□ 1.33
SP9P0CG40 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SP9P0CG40 LINC01003-201ENST00000564834 1764 ntBASIC23.38■■□□□ 1.33
SP9P0CG40 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.38■■□□□ 1.33
SP9P0CG40 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SP9P0CG40 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
SP9P0CG40 AC099791.1-201ENST00000416440 715 ntBASIC23.38■■□□□ 1.33
SP9P0CG40 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.38■■□□□ 1.33
SP9P0CG40 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.38■■□□□ 1.33
SP9P0CG40 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.38■■□□□ 1.33
SP9P0CG40 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.38■■□□□ 1.33
SP9P0CG40 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.38■■□□□ 1.33
SP9P0CG40 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.38■■□□□ 1.33
SP9P0CG40 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SP9P0CG40 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.37■■□□□ 1.33
SP9P0CG40 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SP9P0CG40 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.37■■□□□ 1.33
SP9P0CG40 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.37■■□□□ 1.33
SP9P0CG40 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SP9P0CG40 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
SP9P0CG40 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SP9P0CG40 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SP9P0CG40 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SP9P0CG40 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SP9P0CG40 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SP9P0CG40 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.35■■□□□ 1.33
SP9P0CG40 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SP9P0CG40 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.35■■□□□ 1.33
SP9P0CG40 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SP9P0CG40 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.35■■□□□ 1.33
SP9P0CG40 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.35■■□□□ 1.33
SP9P0CG40 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.35■■□□□ 1.33
SP9P0CG40 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SP9P0CG40 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.35■■□□□ 1.33
SP9P0CG40 AC011298.3-201ENST00000615796 283 ntBASIC23.35■■□□□ 1.33
SP9P0CG40 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SP9P0CG40 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.35■■□□□ 1.33
SP9P0CG40 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SP9P0CG40 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SP9P0CG40 AC005703.6-201ENST00000623265 1329 ntBASIC23.34■■□□□ 1.33
SP9P0CG40 AP004609.3-201ENST00000610705 1884 ntBASIC23.34■■□□□ 1.33
SP9P0CG40 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.34■■□□□ 1.33
SP9P0CG40 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
SP9P0CG40 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.34■■□□□ 1.33
SP9P0CG40 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.34■■□□□ 1.33
SP9P0CG40 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SP9P0CG40 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.33■■□□□ 1.33
SP9P0CG40 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
SP9P0CG40 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.33■■□□□ 1.33
SP9P0CG40 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.33■■□□□ 1.33
SP9P0CG40 AL138724.1-201ENST00000606771 1088 ntBASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms