Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC30.11■■■□□ 2.41
SNRPA1P09661 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
SNRPA1P09661 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
SNRPA1P09661 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
SNRPA1P09661 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
SNRPA1P09661 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.09■■■□□ 2.41
SNRPA1P09661 AL136116.3-201ENST00000402907 1138 ntBASIC30.09■■■□□ 2.41
SNRPA1P09661 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SNRPA1P09661 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC30.08■■■□□ 2.41
SNRPA1P09661 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC30.08■■■□□ 2.41
SNRPA1P09661 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
SNRPA1P09661 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SNRPA1P09661 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
SNRPA1P09661 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.08■■■□□ 2.41
SNRPA1P09661 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC30.08■■■□□ 2.41
SNRPA1P09661 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SNRPA1P09661 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
SNRPA1P09661 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
SNRPA1P09661 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SNRPA1P09661 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC30.07■■■□□ 2.4
SNRPA1P09661 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC30.07■■■□□ 2.4
SNRPA1P09661 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
SNRPA1P09661 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.06■■■□□ 2.4
SNRPA1P09661 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.06■■■□□ 2.4
SNRPA1P09661 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC30.06■■■□□ 2.4
SNRPA1P09661 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.06■■■□□ 2.4
SNRPA1P09661 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SNRPA1P09661 MIR4466-201ENST00000606121 54 ntBASIC30.06■■■□□ 2.4
SNRPA1P09661 MIR6722-201ENST00000617286 78 ntBASIC30.06■■■□□ 2.4
SNRPA1P09661 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.06■■■□□ 2.4
SNRPA1P09661 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SNRPA1P09661 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SNRPA1P09661 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.05■■■□□ 2.4
SNRPA1P09661 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC30.05■■■□□ 2.4
SNRPA1P09661 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
SNRPA1P09661 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
SNRPA1P09661 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.04■■■□□ 2.4
SNRPA1P09661 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
SNRPA1P09661 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.04■■■□□ 2.4
SNRPA1P09661 AL512631.2-201ENST00000604634 923 ntBASIC30.04■■■□□ 2.4
SNRPA1P09661 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
SNRPA1P09661 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SNRPA1P09661 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.03■■■□□ 2.4
SNRPA1P09661 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SNRPA1P09661 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SNRPA1P09661 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
SNRPA1P09661 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.03■■■□□ 2.4
SNRPA1P09661 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
SNRPA1P09661 AL139246.5-201ENST00000606645 996 ntBASIC30.02■■■□□ 2.4
SNRPA1P09661 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.02■■■□□ 2.4
SNRPA1P09661 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.01■■■□□ 2.4
SNRPA1P09661 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SNRPA1P09661 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC30.01■■■□□ 2.39
SNRPA1P09661 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SNRPA1P09661 MIR638-201ENST00000385237 100 ntBASIC30.01■■■□□ 2.39
SNRPA1P09661 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC30.01■■■□□ 2.39
SNRPA1P09661 NALT1-201ENST00000429224 738 ntTSL 5 BASIC30.01■■■□□ 2.39
SNRPA1P09661 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SNRPA1P09661 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
SNRPA1P09661 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30■■■□□ 2.39
SNRPA1P09661 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30■■■□□ 2.39
SNRPA1P09661 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC30■■■□□ 2.39
SNRPA1P09661 RASSF1-AS1-201ENST00000629828 790 ntBASIC30■■■□□ 2.39
SNRPA1P09661 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SNRPA1P09661 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC30■■■□□ 2.39
SNRPA1P09661 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.99■■■□□ 2.39
SNRPA1P09661 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SNRPA1P09661 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC29.99■■■□□ 2.39
SNRPA1P09661 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
SNRPA1P09661 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SNRPA1P09661 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SNRPA1P09661 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC29.98■■■□□ 2.39
SNRPA1P09661 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SNRPA1P09661 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SNRPA1P09661 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC29.98■■■□□ 2.39
SNRPA1P09661 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
SNRPA1P09661 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SNRPA1P09661 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SNRPA1P09661 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
SNRPA1P09661 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SNRPA1P09661 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SNRPA1P09661 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC29.97■■■□□ 2.39
SNRPA1P09661 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SNRPA1P09661 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SNRPA1P09661 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC29.95■■■□□ 2.39
SNRPA1P09661 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SNRPA1P09661 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SNRPA1P09661 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SNRPA1P09661 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
SNRPA1P09661 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
SNRPA1P09661 DUSP8P4-201ENST00000399538 1761 ntBASIC29.95■■■□□ 2.38
SNRPA1P09661 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
SNRPA1P09661 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.38
SNRPA1P09661 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SNRPA1P09661 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
SNRPA1P09661 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.94■■■□□ 2.38
SNRPA1P09661 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SNRPA1P09661 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SNRPA1P09661 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
SNRPA1P09661 SLC6A10P-202ENST00000431994 2058 ntBASIC29.93■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms