Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC129492.7-201ENST00000622992 756 ntBASIC21.49■■□□□ 1.03
THBS1P07996 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
THBS1P07996 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
THBS1P07996 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
THBS1P07996 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
THBS1P07996 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
THBS1P07996 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
THBS1P07996 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
THBS1P07996 AL592295.1-201ENST00000400984 884 ntBASIC21.48■■□□□ 1.03
THBS1P07996 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.48■■□□□ 1.03
THBS1P07996 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.48■■□□□ 1.03
THBS1P07996 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
THBS1P07996 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.48■■□□□ 1.03
THBS1P07996 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
THBS1P07996 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
THBS1P07996 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
THBS1P07996 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.46■■□□□ 1.03
THBS1P07996 KRT18P60-201ENST00000312876 1297 ntBASIC21.46■■□□□ 1.03
THBS1P07996 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.46■■□□□ 1.03
THBS1P07996 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.46■■□□□ 1.03
THBS1P07996 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
THBS1P07996 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
THBS1P07996 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
THBS1P07996 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
THBS1P07996 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.46■■□□□ 1.03
THBS1P07996 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
THBS1P07996 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
THBS1P07996 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
THBS1P07996 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
THBS1P07996 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.45■■□□□ 1.02
THBS1P07996 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
THBS1P07996 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
THBS1P07996 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
THBS1P07996 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
THBS1P07996 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
THBS1P07996 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
THBS1P07996 AC090877.2-201ENST00000558441 1738 ntBASIC21.44■■□□□ 1.02
THBS1P07996 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.44■■□□□ 1.02
THBS1P07996 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
THBS1P07996 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.43■■□□□ 1.02
THBS1P07996 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
THBS1P07996 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
THBS1P07996 LONRF2P2-201ENST00000439212 571 ntBASIC21.43■■□□□ 1.02
THBS1P07996 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
THBS1P07996 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
THBS1P07996 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
THBS1P07996 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
THBS1P07996 AC004812.2-201ENST00000611079 2094 ntBASIC21.43■■□□□ 1.02
THBS1P07996 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
THBS1P07996 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
THBS1P07996 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
THBS1P07996 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
THBS1P07996 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
THBS1P07996 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.42■■□□□ 1.02
THBS1P07996 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.42■■□□□ 1.02
THBS1P07996 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
THBS1P07996 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
THBS1P07996 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
THBS1P07996 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
THBS1P07996 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
THBS1P07996 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
THBS1P07996 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
THBS1P07996 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
THBS1P07996 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
THBS1P07996 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
THBS1P07996 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.41■■□□□ 1.02
THBS1P07996 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
THBS1P07996 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.41■■□□□ 1.02
THBS1P07996 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
THBS1P07996 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
THBS1P07996 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.41■■□□□ 1.02
THBS1P07996 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.41■■□□□ 1.02
THBS1P07996 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
THBS1P07996 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
THBS1P07996 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.4■■□□□ 1.02
THBS1P07996 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
THBS1P07996 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
THBS1P07996 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
THBS1P07996 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
THBS1P07996 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
THBS1P07996 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
THBS1P07996 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
THBS1P07996 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
THBS1P07996 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.39■■□□□ 1.01
THBS1P07996 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.39■■□□□ 1.01
THBS1P07996 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.39■■□□□ 1.01
THBS1P07996 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.39■■□□□ 1.01
THBS1P07996 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
THBS1P07996 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
THBS1P07996 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.38■■□□□ 1.01
THBS1P07996 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.38■■□□□ 1.01
THBS1P07996 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.38■■□□□ 1.01
THBS1P07996 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
THBS1P07996 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
THBS1P07996 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.37■■□□□ 1.01
THBS1P07996 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
THBS1P07996 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
THBS1P07996 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
THBS1P07996 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
THBS1P07996 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms