Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.63■■□□□ 1.37
RETP07949 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RETP07949 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RETP07949 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.62■■□□□ 1.37
RETP07949 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.62■■□□□ 1.37
RETP07949 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RETP07949 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.62■■□□□ 1.37
RETP07949 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.62■■□□□ 1.37
RETP07949 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.62■■□□□ 1.37
RETP07949 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
RETP07949 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.62■■□□□ 1.37
RETP07949 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RETP07949 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RETP07949 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RETP07949 UNC93B3-201ENST00000308076 687 ntBASIC23.61■■□□□ 1.37
RETP07949 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RETP07949 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RETP07949 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.6■■□□□ 1.37
RETP07949 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.6■■□□□ 1.37
RETP07949 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.6■■□□□ 1.37
RETP07949 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RETP07949 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.59■■□□□ 1.37
RETP07949 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RETP07949 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RETP07949 AL136162.1-201ENST00000607711 1078 ntBASIC23.59■■□□□ 1.37
RETP07949 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.59■■□□□ 1.37
RETP07949 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.59■■□□□ 1.37
RETP07949 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
RETP07949 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RETP07949 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.58■■□□□ 1.37
RETP07949 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.58■■□□□ 1.37
RETP07949 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RETP07949 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.58■■□□□ 1.37
RETP07949 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.58■■□□□ 1.37
RETP07949 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
RETP07949 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RETP07949 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.58■■□□□ 1.36
RETP07949 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
RETP07949 EDA-201ENST00000338901 1233 ntBASIC23.57■■□□□ 1.36
RETP07949 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RETP07949 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
RETP07949 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.57■■□□□ 1.36
RETP07949 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.57■■□□□ 1.36
RETP07949 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.57■■□□□ 1.36
RETP07949 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RETP07949 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
RETP07949 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
RETP07949 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RETP07949 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.56■■□□□ 1.36
RETP07949 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RETP07949 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RETP07949 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
RETP07949 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RETP07949 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RETP07949 AL355001.2-201ENST00000620617 1191 ntBASIC23.56■■□□□ 1.36
RETP07949 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RETP07949 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RETP07949 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
RETP07949 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RETP07949 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RETP07949 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RETP07949 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
RETP07949 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
RETP07949 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
RETP07949 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RETP07949 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RETP07949 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RETP07949 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
RETP07949 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.54■■□□□ 1.36
RETP07949 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
RETP07949 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RETP07949 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RETP07949 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RETP07949 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.53■■□□□ 1.36
RETP07949 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.53■■□□□ 1.36
RETP07949 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.53■■□□□ 1.36
RETP07949 AC145676.1-201ENST00000514988 2004 ntBASIC23.53■■□□□ 1.36
RETP07949 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.53■■□□□ 1.36
RETP07949 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RETP07949 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.53■■□□□ 1.36
RETP07949 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RETP07949 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RETP07949 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.52■■□□□ 1.36
RETP07949 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RETP07949 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.52■■□□□ 1.36
RETP07949 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
RETP07949 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.51■■□□□ 1.35
RETP07949 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RETP07949 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RETP07949 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RETP07949 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
RETP07949 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.51■■□□□ 1.35
RETP07949 AC105265.2-201ENST00000467189 838 ntBASIC23.51■■□□□ 1.35
RETP07949 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.51■■□□□ 1.35
RETP07949 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.51■■□□□ 1.35
RETP07949 MIR6821-201ENST00000617625 74 ntBASIC23.51■■□□□ 1.35
RETP07949 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RETP07949 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
RETP07949 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RETP07949 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms