Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
APPP05067 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.98■■■□□ 2.07
APPP05067 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
APPP05067 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
APPP05067 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
APPP05067 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.97■■■□□ 2.07
APPP05067 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.97■■■□□ 2.07
APPP05067 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
APPP05067 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
APPP05067 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.97■■■□□ 2.07
APPP05067 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
APPP05067 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
APPP05067 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
APPP05067 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
APPP05067 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
APPP05067 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
APPP05067 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
APPP05067 AC239859.2-201ENST00000444165 318 ntBASIC27.95■■■□□ 2.06
APPP05067 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.95■■■□□ 2.06
APPP05067 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
APPP05067 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
APPP05067 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
APPP05067 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC27.94■■■□□ 2.06
APPP05067 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
APPP05067 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
APPP05067 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC27.94■■■□□ 2.06
APPP05067 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
APPP05067 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
APPP05067 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
APPP05067 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
APPP05067 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
APPP05067 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
APPP05067 BX664725.1-201ENST00000438252 379 ntBASIC27.93■■■□□ 2.06
APPP05067 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC27.93■■■□□ 2.06
APPP05067 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
APPP05067 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC27.93■■■□□ 2.06
APPP05067 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
APPP05067 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.92■■■□□ 2.06
APPP05067 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
APPP05067 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC27.92■■■□□ 2.06
APPP05067 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC27.92■■■□□ 2.06
APPP05067 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.92■■■□□ 2.06
APPP05067 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
APPP05067 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
APPP05067 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
APPP05067 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
APPP05067 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
APPP05067 TRIR-205ENST00000592273 783 ntTSL 3 BASIC27.91■■■□□ 2.06
APPP05067 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
APPP05067 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
APPP05067 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
APPP05067 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
APPP05067 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.9■■■□□ 2.06
APPP05067 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
APPP05067 AC137630.3-201ENST00000607245 391 ntBASIC27.9■■■□□ 2.06
APPP05067 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.9■■■□□ 2.06
APPP05067 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.9■■■□□ 2.06
APPP05067 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
APPP05067 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
APPP05067 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC27.9■■■□□ 2.06
APPP05067 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27.89■■■□□ 2.06
APPP05067 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC27.89■■■□□ 2.06
APPP05067 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
APPP05067 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.06
APPP05067 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC27.89■■■□□ 2.06
APPP05067 KRT125P-201ENST00000546827 989 ntBASIC27.89■■■□□ 2.06
APPP05067 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
APPP05067 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
APPP05067 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
APPP05067 HES6-204ENST00000409182 863 ntTSL 2 BASIC27.88■■■□□ 2.05
APPP05067 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
APPP05067 Z92544.1-202ENST00000571933 1220 ntBASIC27.88■■■□□ 2.05
APPP05067 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
APPP05067 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
APPP05067 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
APPP05067 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
APPP05067 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
APPP05067 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
APPP05067 OR2A1-AS1-204ENST00000470435 602 ntBASIC27.87■■■□□ 2.05
APPP05067 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.87■■■□□ 2.05
APPP05067 MIR6089-201ENST00000616698 64 ntBASIC27.87■■■□□ 2.05
APPP05067 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
APPP05067 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
APPP05067 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
APPP05067 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
APPP05067 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
APPP05067 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
APPP05067 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.85■■■□□ 2.05
APPP05067 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.85■■■□□ 2.05
APPP05067 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
APPP05067 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.85■■■□□ 2.05
APPP05067 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.85■■■□□ 2.05
APPP05067 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC27.85■■■□□ 2.05
APPP05067 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
APPP05067 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.84■■■□□ 2.05
APPP05067 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
APPP05067 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
APPP05067 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
APPP05067 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
APPP05067 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms