Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH8O95206 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
PCDH8O95206 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
PCDH8O95206 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDH8O95206 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH8O95206 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH8O95206 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH8O95206 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH8O95206 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH8O95206 AC145676.1-201ENST00000514988 2004 ntBASIC23.37■■□□□ 1.33
PCDH8O95206 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDH8O95206 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
PCDH8O95206 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDH8O95206 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDH8O95206 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
PCDH8O95206 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH8O95206 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PCDH8O95206 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH8O95206 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.36■■□□□ 1.33
PCDH8O95206 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.36■■□□□ 1.33
PCDH8O95206 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDH8O95206 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.35■■□□□ 1.33
PCDH8O95206 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH8O95206 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH8O95206 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH8O95206 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH8O95206 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH8O95206 AC008406.3-201ENST00000620001 1374 ntBASIC23.35■■□□□ 1.33
PCDH8O95206 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH8O95206 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH8O95206 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH8O95206 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH8O95206 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH8O95206 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH8O95206 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH8O95206 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.33■■□□□ 1.33
PCDH8O95206 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDH8O95206 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH8O95206 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDH8O95206 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.33■■□□□ 1.33
PCDH8O95206 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.32
PCDH8O95206 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
PCDH8O95206 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PCDH8O95206 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
PCDH8O95206 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH8O95206 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH8O95206 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH8O95206 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDH8O95206 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.32■■□□□ 1.32
PCDH8O95206 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PCDH8O95206 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH8O95206 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH8O95206 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDH8O95206 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDH8O95206 SLC6A10P-202ENST00000431994 2058 ntBASIC23.31■■□□□ 1.32
PCDH8O95206 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH8O95206 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH8O95206 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH8O95206 MIR6724-1-201ENST00000616420 92 ntBASIC23.3■■□□□ 1.32
PCDH8O95206 MIR6724-2-201ENST00000616483 92 ntBASIC23.3■■□□□ 1.32
PCDH8O95206 MIR6724-4-201ENST00000617390 92 ntBASIC23.3■■□□□ 1.32
PCDH8O95206 MIR6724-3-201ENST00000622482 92 ntBASIC23.3■■□□□ 1.32
PCDH8O95206 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDH8O95206 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH8O95206 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH8O95206 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PCDH8O95206 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.3■■□□□ 1.32
PCDH8O95206 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDH8O95206 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDH8O95206 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH8O95206 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH8O95206 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PCDH8O95206 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDH8O95206 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDH8O95206 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH8O95206 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDH8O95206 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH8O95206 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH8O95206 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH8O95206 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH8O95206 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH8O95206 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDH8O95206 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.28■■□□□ 1.32
PCDH8O95206 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDH8O95206 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDH8O95206 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.28■■□□□ 1.32
PCDH8O95206 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDH8O95206 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH8O95206 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDH8O95206 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.27■■□□□ 1.32
PCDH8O95206 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH8O95206 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH8O95206 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDH8O95206 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDH8O95206 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDH8O95206 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDH8O95206 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
PCDH8O95206 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
PCDH8O95206 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH8O95206 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms