Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRAMEF11O60813 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRAMEF11O60813 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
PRAMEF11O60813 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PRAMEF11O60813 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PRAMEF11O60813 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.81■■□□□ 1.4
PRAMEF11O60813 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRAMEF11O60813 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRAMEF11O60813 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRAMEF11O60813 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PRAMEF11O60813 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PRAMEF11O60813 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PRAMEF11O60813 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRAMEF11O60813 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
PRAMEF11O60813 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.8■■□□□ 1.4
PRAMEF11O60813 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.8■■□□□ 1.4
PRAMEF11O60813 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRAMEF11O60813 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PRAMEF11O60813 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PRAMEF11O60813 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PRAMEF11O60813 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PRAMEF11O60813 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.79■■□□□ 1.4
PRAMEF11O60813 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.79■■□□□ 1.4
PRAMEF11O60813 AL451085.2-201ENST00000605085 799 ntBASIC23.79■■□□□ 1.4
PRAMEF11O60813 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.79■■□□□ 1.4
PRAMEF11O60813 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
PRAMEF11O60813 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRAMEF11O60813 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.78■■□□□ 1.4
PRAMEF11O60813 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRAMEF11O60813 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.77■■□□□ 1.4
PRAMEF11O60813 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PRAMEF11O60813 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.77■■□□□ 1.4
PRAMEF11O60813 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRAMEF11O60813 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRAMEF11O60813 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.76■■□□□ 1.39
PRAMEF11O60813 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRAMEF11O60813 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRAMEF11O60813 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRAMEF11O60813 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.76■■□□□ 1.39
PRAMEF11O60813 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.76■■□□□ 1.39
PRAMEF11O60813 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
PRAMEF11O60813 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRAMEF11O60813 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PRAMEF11O60813 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PRAMEF11O60813 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRAMEF11O60813 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRAMEF11O60813 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRAMEF11O60813 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRAMEF11O60813 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRAMEF11O60813 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRAMEF11O60813 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRAMEF11O60813 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PRAMEF11O60813 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRAMEF11O60813 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRAMEF11O60813 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRAMEF11O60813 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRAMEF11O60813 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PRAMEF11O60813 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PRAMEF11O60813 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRAMEF11O60813 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PRAMEF11O60813 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.72■■□□□ 1.39
PRAMEF11O60813 AC009299.2-201ENST00000482477 511 ntBASIC23.72■■□□□ 1.39
PRAMEF11O60813 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.72■■□□□ 1.39
PRAMEF11O60813 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PRAMEF11O60813 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
PRAMEF11O60813 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.72■■□□□ 1.39
PRAMEF11O60813 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
PRAMEF11O60813 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PRAMEF11O60813 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.72■■□□□ 1.39
PRAMEF11O60813 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PRAMEF11O60813 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PRAMEF11O60813 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PRAMEF11O60813 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.71■■□□□ 1.39
PRAMEF11O60813 AF131216.4-201ENST00000638924 1588 ntBASIC23.71■■□□□ 1.39
PRAMEF11O60813 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PRAMEF11O60813 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
PRAMEF11O60813 AC137630.3-201ENST00000607245 391 ntBASIC23.71■■□□□ 1.39
PRAMEF11O60813 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PRAMEF11O60813 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PRAMEF11O60813 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PRAMEF11O60813 HLA-L-211ENST00000482052 1765 ntBASIC23.7■■□□□ 1.39
PRAMEF11O60813 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PRAMEF11O60813 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PRAMEF11O60813 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PRAMEF11O60813 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PRAMEF11O60813 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.7■■□□□ 1.38
PRAMEF11O60813 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.7■■□□□ 1.38
PRAMEF11O60813 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
PRAMEF11O60813 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
PRAMEF11O60813 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.69■■□□□ 1.38
PRAMEF11O60813 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRAMEF11O60813 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.69■■□□□ 1.38
PRAMEF11O60813 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.69■■□□□ 1.38
PRAMEF11O60813 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.69■■□□□ 1.38
PRAMEF11O60813 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PRAMEF11O60813 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.69■■□□□ 1.38
PRAMEF11O60813 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PRAMEF11O60813 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PRAMEF11O60813 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PRAMEF11O60813 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms