Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZFC3H1O60293 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.17■■□□□ 1.3
ZFC3H1O60293 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZFC3H1O60293 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.16■■□□□ 1.3
ZFC3H1O60293 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ZFC3H1O60293 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZFC3H1O60293 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.16■■□□□ 1.3
ZFC3H1O60293 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZFC3H1O60293 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ZFC3H1O60293 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZFC3H1O60293 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.16■■□□□ 1.3
ZFC3H1O60293 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ZFC3H1O60293 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZFC3H1O60293 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZFC3H1O60293 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZFC3H1O60293 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
ZFC3H1O60293 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.15■■□□□ 1.3
ZFC3H1O60293 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZFC3H1O60293 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ZFC3H1O60293 THA1P-201ENST00000590384 1145 ntBASIC23.14■■□□□ 1.3
ZFC3H1O60293 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.14■■□□□ 1.3
ZFC3H1O60293 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
ZFC3H1O60293 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZFC3H1O60293 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZFC3H1O60293 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.14■■□□□ 1.29
ZFC3H1O60293 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.14■■□□□ 1.29
ZFC3H1O60293 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.14■■□□□ 1.29
ZFC3H1O60293 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ZFC3H1O60293 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZFC3H1O60293 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
ZFC3H1O60293 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZFC3H1O60293 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
ZFC3H1O60293 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZFC3H1O60293 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZFC3H1O60293 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZFC3H1O60293 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZFC3H1O60293 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.12■■□□□ 1.29
ZFC3H1O60293 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZFC3H1O60293 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZFC3H1O60293 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.12■■□□□ 1.29
ZFC3H1O60293 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZFC3H1O60293 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZFC3H1O60293 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZFC3H1O60293 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZFC3H1O60293 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
ZFC3H1O60293 AC022211.4-201ENST00000625094 2161 ntBASIC23.11■■□□□ 1.29
ZFC3H1O60293 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
ZFC3H1O60293 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.1■■□□□ 1.29
ZFC3H1O60293 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.1■■□□□ 1.29
ZFC3H1O60293 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.1■■□□□ 1.29
ZFC3H1O60293 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ZFC3H1O60293 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.09■■□□□ 1.29
ZFC3H1O60293 AC120024.1-201ENST00000562672 995 ntBASIC23.09■■□□□ 1.29
ZFC3H1O60293 AC137630.3-201ENST00000607245 391 ntBASIC23.09■■□□□ 1.29
ZFC3H1O60293 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZFC3H1O60293 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZFC3H1O60293 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZFC3H1O60293 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZFC3H1O60293 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZFC3H1O60293 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.09■■□□□ 1.29
ZFC3H1O60293 MIR4787-201ENST00000607364 84 ntBASIC23.09■■□□□ 1.29
ZFC3H1O60293 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
ZFC3H1O60293 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZFC3H1O60293 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZFC3H1O60293 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ZFC3H1O60293 SLC6A10P-202ENST00000431994 2058 ntBASIC23.08■■□□□ 1.29
ZFC3H1O60293 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZFC3H1O60293 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
ZFC3H1O60293 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.28
ZFC3H1O60293 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
ZFC3H1O60293 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ZFC3H1O60293 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.07■■□□□ 1.28
ZFC3H1O60293 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ZFC3H1O60293 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.07■■□□□ 1.28
ZFC3H1O60293 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.07■■□□□ 1.28
ZFC3H1O60293 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZFC3H1O60293 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ZFC3H1O60293 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZFC3H1O60293 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZFC3H1O60293 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.06■■□□□ 1.28
ZFC3H1O60293 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
ZFC3H1O60293 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZFC3H1O60293 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZFC3H1O60293 AC239859.2-201ENST00000444165 318 ntBASIC23.06■■□□□ 1.28
ZFC3H1O60293 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZFC3H1O60293 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
ZFC3H1O60293 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZFC3H1O60293 FOXO3B-201ENST00000395675 1928 ntBASIC23.06■■□□□ 1.28
ZFC3H1O60293 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZFC3H1O60293 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZFC3H1O60293 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZFC3H1O60293 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.05■■□□□ 1.28
ZFC3H1O60293 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ZFC3H1O60293 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.05■■□□□ 1.28
ZFC3H1O60293 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZFC3H1O60293 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.04■■□□□ 1.28
ZFC3H1O60293 KRT125P-201ENST00000546827 989 ntBASIC23.04■■□□□ 1.28
ZFC3H1O60293 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.04■■□□□ 1.28
ZFC3H1O60293 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ZFC3H1O60293 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms