Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
NCK2O43639 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.71
NCK2O43639 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
NCK2O43639 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.71
NCK2O43639 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.7■■□□□ 1.7
NCK2O43639 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.7■■□□□ 1.7
NCK2O43639 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.7■■□□□ 1.7
NCK2O43639 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
NCK2O43639 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
NCK2O43639 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NCK2O43639 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
NCK2O43639 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
NCK2O43639 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
NCK2O43639 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
NCK2O43639 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NCK2O43639 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
NCK2O43639 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.69■■□□□ 1.7
NCK2O43639 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NCK2O43639 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
NCK2O43639 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.68■■□□□ 1.7
NCK2O43639 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
NCK2O43639 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
NCK2O43639 AC021242.3-201ENST00000607598 1377 ntBASIC25.68■■□□□ 1.7
NCK2O43639 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NCK2O43639 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NCK2O43639 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NCK2O43639 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.67■■□□□ 1.7
NCK2O43639 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NCK2O43639 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.66■■□□□ 1.7
NCK2O43639 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NCK2O43639 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.66■■□□□ 1.7
NCK2O43639 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
NCK2O43639 AC138932.3-201ENST00000567634 1902 ntBASIC25.65■■□□□ 1.7
NCK2O43639 AC142381.3-201ENST00000568208 1670 ntBASIC25.65■■□□□ 1.7
NCK2O43639 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
NCK2O43639 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.65■■□□□ 1.7
NCK2O43639 TSPY9P-201ENST00000440215 945 ntBASIC25.65■■□□□ 1.7
NCK2O43639 TSPY11P-201ENST00000442607 1045 ntBASIC25.65■■□□□ 1.7
NCK2O43639 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NCK2O43639 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
NCK2O43639 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.65■■□□□ 1.7
NCK2O43639 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
NCK2O43639 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
NCK2O43639 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
NCK2O43639 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.64■■□□□ 1.7
NCK2O43639 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.64■■□□□ 1.69
NCK2O43639 AC022211.4-201ENST00000625094 2161 ntBASIC25.63■■□□□ 1.69
NCK2O43639 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
NCK2O43639 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.63■■□□□ 1.69
NCK2O43639 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NCK2O43639 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NCK2O43639 AC096887.2-201ENST00000623443 1957 ntBASIC25.63■■□□□ 1.69
NCK2O43639 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NCK2O43639 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.63■■□□□ 1.69
NCK2O43639 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NCK2O43639 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NCK2O43639 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NCK2O43639 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NCK2O43639 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NCK2O43639 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.62■■□□□ 1.69
NCK2O43639 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.62■■□□□ 1.69
NCK2O43639 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
NCK2O43639 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
NCK2O43639 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NCK2O43639 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NCK2O43639 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NCK2O43639 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.61■■□□□ 1.69
NCK2O43639 AC131281.2-201ENST00000520478 145 ntBASIC25.61■■□□□ 1.69
NCK2O43639 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NCK2O43639 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.61■■□□□ 1.69
NCK2O43639 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.61■■□□□ 1.69
NCK2O43639 AC092028.1-203ENST00000608262 953 ntBASIC25.61■■□□□ 1.69
NCK2O43639 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.61■■□□□ 1.69
NCK2O43639 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NCK2O43639 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NCK2O43639 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
NCK2O43639 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.6■■□□□ 1.69
NCK2O43639 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.6■■□□□ 1.69
NCK2O43639 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NCK2O43639 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
NCK2O43639 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NCK2O43639 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NCK2O43639 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.59■■□□□ 1.69
NCK2O43639 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.59■■□□□ 1.69
NCK2O43639 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
NCK2O43639 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
NCK2O43639 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.59■■□□□ 1.69
NCK2O43639 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NCK2O43639 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NCK2O43639 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.58■■□□□ 1.69
NCK2O43639 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
NCK2O43639 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NCK2O43639 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
NCK2O43639 AL136116.3-201ENST00000402907 1138 ntBASIC25.58■■□□□ 1.69
NCK2O43639 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.58■■□□□ 1.69
NCK2O43639 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.58■■□□□ 1.69
NCK2O43639 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NCK2O43639 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NCK2O43639 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NCK2O43639 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms