Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CHL1O00533 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.31■■■□□ 2.44
CHL1O00533 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
CHL1O00533 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CHL1O00533 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.31■■■□□ 2.44
CHL1O00533 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC30.31■■■□□ 2.44
CHL1O00533 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
CHL1O00533 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CHL1O00533 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
CHL1O00533 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
CHL1O00533 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.3■■■□□ 2.44
CHL1O00533 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC30.3■■■□□ 2.44
CHL1O00533 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CHL1O00533 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CHL1O00533 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CHL1O00533 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
CHL1O00533 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.29■■■□□ 2.44
CHL1O00533 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.29■■■□□ 2.44
CHL1O00533 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CHL1O00533 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CHL1O00533 AC092028.1-203ENST00000608262 953 ntBASIC30.29■■■□□ 2.44
CHL1O00533 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CHL1O00533 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CHL1O00533 LSR-205ENST00000427250 1606 ntTSL 2 BASIC30.29■■■□□ 2.44
CHL1O00533 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
CHL1O00533 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC30.29■■■□□ 2.44
CHL1O00533 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.28■■■□□ 2.44
CHL1O00533 UNC93B8-201ENST00000511903 705 ntBASIC30.28■■■□□ 2.44
CHL1O00533 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CHL1O00533 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CHL1O00533 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CHL1O00533 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CHL1O00533 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CHL1O00533 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.27■■■□□ 2.44
CHL1O00533 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.27■■■□□ 2.44
CHL1O00533 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CHL1O00533 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CHL1O00533 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CHL1O00533 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.26■■■□□ 2.43
CHL1O00533 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CHL1O00533 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC30.25■■■□□ 2.43
CHL1O00533 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC30.25■■■□□ 2.43
CHL1O00533 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.25■■■□□ 2.43
CHL1O00533 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
CHL1O00533 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CHL1O00533 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CHL1O00533 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
CHL1O00533 AL356441.2-201ENST00000443009 864 ntBASIC30.24■■■□□ 2.43
CHL1O00533 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.24■■■□□ 2.43
CHL1O00533 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.23■■■□□ 2.43
CHL1O00533 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC30.23■■■□□ 2.43
CHL1O00533 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CHL1O00533 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.23■■■□□ 2.43
CHL1O00533 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.23■■■□□ 2.43
CHL1O00533 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.23■■■□□ 2.43
CHL1O00533 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CHL1O00533 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
CHL1O00533 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
CHL1O00533 AC022211.4-201ENST00000625094 2161 ntBASIC30.22■■■□□ 2.43
CHL1O00533 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
CHL1O00533 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHL1O00533 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.22■■■□□ 2.43
CHL1O00533 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.22■■■□□ 2.43
CHL1O00533 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.22■■■□□ 2.43
CHL1O00533 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHL1O00533 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHL1O00533 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CHL1O00533 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CHL1O00533 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CHL1O00533 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.21■■■□□ 2.43
CHL1O00533 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC30.21■■■□□ 2.43
CHL1O00533 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CHL1O00533 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC30.2■■■□□ 2.43
CHL1O00533 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
CHL1O00533 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CHL1O00533 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CHL1O00533 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CHL1O00533 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
CHL1O00533 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CHL1O00533 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.19■■■□□ 2.42
CHL1O00533 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC30.19■■■□□ 2.42
CHL1O00533 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CHL1O00533 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC30.19■■■□□ 2.42
CHL1O00533 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.19■■■□□ 2.42
CHL1O00533 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CHL1O00533 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CHL1O00533 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC30.19■■■□□ 2.42
CHL1O00533 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
CHL1O00533 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.18■■■□□ 2.42
CHL1O00533 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.18■■■□□ 2.42
CHL1O00533 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
CHL1O00533 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC30.18■■■□□ 2.42
CHL1O00533 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
CHL1O00533 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
CHL1O00533 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHL1O00533 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.17■■■□□ 2.42
CHL1O00533 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHL1O00533 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CHL1O00533 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.17■■■□□ 2.42
CHL1O00533 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms