Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SMKR1H3BMG3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.99■□□□□ 0.31
SMKR1H3BMG3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMKR1H3BMG3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMKR1H3BMG3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMKR1H3BMG3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMKR1H3BMG3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMKR1H3BMG3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.98■□□□□ 0.31
SMKR1H3BMG3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMKR1H3BMG3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMKR1H3BMG3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SMKR1H3BMG3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.98■□□□□ 0.31
SMKR1H3BMG3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.98■□□□□ 0.31
SMKR1H3BMG3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SMKR1H3BMG3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMKR1H3BMG3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
SMKR1H3BMG3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMKR1H3BMG3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMKR1H3BMG3 PKD1P6-201ENST00000343738 4769 ntBASIC16.97■□□□□ 0.31
SMKR1H3BMG3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SMKR1H3BMG3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.97■□□□□ 0.31
SMKR1H3BMG3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SMKR1H3BMG3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMKR1H3BMG3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMKR1H3BMG3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMKR1H3BMG3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMKR1H3BMG3 EP400NL-214ENST00000641289 2402 ntBASIC16.96■□□□□ 0.3
SMKR1H3BMG3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMKR1H3BMG3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMKR1H3BMG3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SMKR1H3BMG3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMKR1H3BMG3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SMKR1H3BMG3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMKR1H3BMG3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SMKR1H3BMG3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.95■□□□□ 0.3
SMKR1H3BMG3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMKR1H3BMG3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.95■□□□□ 0.3
SMKR1H3BMG3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMKR1H3BMG3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMKR1H3BMG3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
SMKR1H3BMG3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.94■□□□□ 0.3
SMKR1H3BMG3 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.94■□□□□ 0.3
SMKR1H3BMG3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.94■□□□□ 0.3
SMKR1H3BMG3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.94■□□□□ 0.3
SMKR1H3BMG3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.94■□□□□ 0.3
SMKR1H3BMG3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMKR1H3BMG3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMKR1H3BMG3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SMKR1H3BMG3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMKR1H3BMG3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMKR1H3BMG3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMKR1H3BMG3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
SMKR1H3BMG3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMKR1H3BMG3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMKR1H3BMG3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SMKR1H3BMG3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMKR1H3BMG3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMKR1H3BMG3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.93■□□□□ 0.3
SMKR1H3BMG3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMKR1H3BMG3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMKR1H3BMG3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.93■□□□□ 0.3
SMKR1H3BMG3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMKR1H3BMG3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMKR1H3BMG3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.92■□□□□ 0.3
SMKR1H3BMG3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.92■□□□□ 0.3
SMKR1H3BMG3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMKR1H3BMG3 AC233723.2-201ENST00000623798 2106 ntBASIC16.92■□□□□ 0.3
SMKR1H3BMG3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMKR1H3BMG3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.92■□□□□ 0.3
SMKR1H3BMG3 LINC00565-201ENST00000562710 2331 ntBASIC16.92■□□□□ 0.3
SMKR1H3BMG3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMKR1H3BMG3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.92■□□□□ 0.3
SMKR1H3BMG3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMKR1H3BMG3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.91■□□□□ 0.3
SMKR1H3BMG3 AP006261.1-201ENST00000584783 668 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms