Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.5■□□□□ 0.55
PCP4L1A6NKN8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCP4L1A6NKN8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PCP4L1A6NKN8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCP4L1A6NKN8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCP4L1A6NKN8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCP4L1A6NKN8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCP4L1A6NKN8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCP4L1A6NKN8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.48■□□□□ 0.55
PCP4L1A6NKN8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCP4L1A6NKN8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCP4L1A6NKN8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCP4L1A6NKN8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCP4L1A6NKN8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.48■□□□□ 0.55
PCP4L1A6NKN8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCP4L1A6NKN8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCP4L1A6NKN8 AC097639.1-201ENST00000565519 1891 ntBASIC18.48■□□□□ 0.55
PCP4L1A6NKN8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCP4L1A6NKN8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PCP4L1A6NKN8 AC137767.1-201ENST00000602918 1920 ntBASIC18.47■□□□□ 0.55
PCP4L1A6NKN8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.47■□□□□ 0.55
PCP4L1A6NKN8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCP4L1A6NKN8 LINC01124-201ENST00000409786 2117 ntBASIC18.47■□□□□ 0.55
PCP4L1A6NKN8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.47■□□□□ 0.55
PCP4L1A6NKN8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCP4L1A6NKN8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCP4L1A6NKN8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCP4L1A6NKN8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCP4L1A6NKN8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCP4L1A6NKN8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCP4L1A6NKN8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PCP4L1A6NKN8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCP4L1A6NKN8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCP4L1A6NKN8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PCP4L1A6NKN8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PCP4L1A6NKN8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCP4L1A6NKN8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCP4L1A6NKN8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCP4L1A6NKN8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCP4L1A6NKN8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCP4L1A6NKN8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCP4L1A6NKN8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCP4L1A6NKN8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCP4L1A6NKN8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCP4L1A6NKN8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.44■□□□□ 0.54
PCP4L1A6NKN8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCP4L1A6NKN8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCP4L1A6NKN8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
PCP4L1A6NKN8 AC007952.6-201ENST00000573168 2673 ntBASIC18.44■□□□□ 0.54
PCP4L1A6NKN8 AC003957.1-201ENST00000625108 2673 ntBASIC18.44■□□□□ 0.54
PCP4L1A6NKN8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCP4L1A6NKN8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCP4L1A6NKN8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCP4L1A6NKN8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCP4L1A6NKN8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCP4L1A6NKN8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCP4L1A6NKN8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.43■□□□□ 0.54
PCP4L1A6NKN8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCP4L1A6NKN8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCP4L1A6NKN8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
PCP4L1A6NKN8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCP4L1A6NKN8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCP4L1A6NKN8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCP4L1A6NKN8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCP4L1A6NKN8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
PCP4L1A6NKN8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCP4L1A6NKN8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCP4L1A6NKN8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCP4L1A6NKN8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
PCP4L1A6NKN8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCP4L1A6NKN8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.42■□□□□ 0.54
PCP4L1A6NKN8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCP4L1A6NKN8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCP4L1A6NKN8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCP4L1A6NKN8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCP4L1A6NKN8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
PCP4L1A6NKN8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCP4L1A6NKN8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCP4L1A6NKN8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCP4L1A6NKN8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.41■□□□□ 0.54
PCP4L1A6NKN8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCP4L1A6NKN8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCP4L1A6NKN8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCP4L1A6NKN8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC18.41■□□□□ 0.54
PCP4L1A6NKN8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCP4L1A6NKN8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCP4L1A6NKN8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCP4L1A6NKN8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PCP4L1A6NKN8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCP4L1A6NKN8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCP4L1A6NKN8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCP4L1A6NKN8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.39■□□□□ 0.54
PCP4L1A6NKN8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCP4L1A6NKN8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.39■□□□□ 0.53
PCP4L1A6NKN8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCP4L1A6NKN8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCP4L1A6NKN8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCP4L1A6NKN8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCP4L1A6NKN8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCP4L1A6NKN8 AL158211.5-201ENST00000623583 2518 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms