Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCOL1A6NCL2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.54■□□□□ 0.08
LRCOL1A6NCL2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCOL1A6NCL2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCOL1A6NCL2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC15.53■□□□□ 0.08
LRCOL1A6NCL2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRCOL1A6NCL2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCOL1A6NCL2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
LRCOL1A6NCL2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.53■□□□□ 0.08
LRCOL1A6NCL2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCOL1A6NCL2 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.53■□□□□ 0.08
LRCOL1A6NCL2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC15.53■□□□□ 0.08
LRCOL1A6NCL2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCOL1A6NCL2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCOL1A6NCL2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCOL1A6NCL2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.52■□□□□ 0.08
LRCOL1A6NCL2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LRCOL1A6NCL2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCOL1A6NCL2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC15.52■□□□□ 0.08
LRCOL1A6NCL2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCOL1A6NCL2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRCOL1A6NCL2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCOL1A6NCL2 AC021242.3-201ENST00000607598 1377 ntBASIC15.52■□□□□ 0.08
LRCOL1A6NCL2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCOL1A6NCL2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCOL1A6NCL2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRCOL1A6NCL2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
LRCOL1A6NCL2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC15.52■□□□□ 0.07
LRCOL1A6NCL2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC15.52■□□□□ 0.07
LRCOL1A6NCL2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC15.52■□□□□ 0.07
LRCOL1A6NCL2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
LRCOL1A6NCL2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
LRCOL1A6NCL2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRCOL1A6NCL2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCOL1A6NCL2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
LRCOL1A6NCL2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRCOL1A6NCL2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCOL1A6NCL2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCOL1A6NCL2 AL356441.2-201ENST00000443009 864 ntBASIC15.51■□□□□ 0.07
LRCOL1A6NCL2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRCOL1A6NCL2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCOL1A6NCL2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRCOL1A6NCL2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LRCOL1A6NCL2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRCOL1A6NCL2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC15.5■□□□□ 0.07
LRCOL1A6NCL2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC15.5■□□□□ 0.07
LRCOL1A6NCL2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC15.5■□□□□ 0.07
LRCOL1A6NCL2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCOL1A6NCL2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRCOL1A6NCL2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.5■□□□□ 0.07
LRCOL1A6NCL2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.5■□□□□ 0.07
LRCOL1A6NCL2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.5■□□□□ 0.07
LRCOL1A6NCL2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LRCOL1A6NCL2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRCOL1A6NCL2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRCOL1A6NCL2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LRCOL1A6NCL2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRCOL1A6NCL2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LRCOL1A6NCL2 DUSP8P4-201ENST00000399538 1761 ntBASIC15.49■□□□□ 0.07
LRCOL1A6NCL2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRCOL1A6NCL2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCOL1A6NCL2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LRCOL1A6NCL2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC15.49■□□□□ 0.07
LRCOL1A6NCL2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.49■□□□□ 0.07
LRCOL1A6NCL2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
LRCOL1A6NCL2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LRCOL1A6NCL2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC15.49■□□□□ 0.07
LRCOL1A6NCL2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRCOL1A6NCL2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRCOL1A6NCL2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCOL1A6NCL2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCOL1A6NCL2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCOL1A6NCL2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCOL1A6NCL2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCOL1A6NCL2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCOL1A6NCL2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.48■□□□□ 0.07
LRCOL1A6NCL2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCOL1A6NCL2 AC091060.1-201ENST00000623524 1766 ntBASIC15.47■□□□□ 0.07
LRCOL1A6NCL2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCOL1A6NCL2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCOL1A6NCL2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCOL1A6NCL2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCOL1A6NCL2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.47■□□□□ 0.07
LRCOL1A6NCL2 UNC93B8-201ENST00000511903 705 ntBASIC15.47■□□□□ 0.07
LRCOL1A6NCL2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCOL1A6NCL2 AC090877.2-201ENST00000558441 1738 ntBASIC15.47■□□□□ 0.07
LRCOL1A6NCL2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCOL1A6NCL2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.47■□□□□ 0.07
LRCOL1A6NCL2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LRCOL1A6NCL2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRCOL1A6NCL2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRCOL1A6NCL2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCOL1A6NCL2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
LRCOL1A6NCL2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCOL1A6NCL2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC15.46■□□□□ 0.07
LRCOL1A6NCL2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LRCOL1A6NCL2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.46■□□□□ 0.07
LRCOL1A6NCL2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.46■□□□□ 0.07
LRCOL1A6NCL2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.46■□□□□ 0.07
LRCOL1A6NCL2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms